RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MMP2P08253 660 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 ERVK-10P10266 1014 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 HOXD9P28356 352 aaPredicted RBP20.03■□□□□ 0.8
SSH1-209ENST00000551165 RPA3P35244 121 aaPredicted RBP20.03■□□□□ 0.8
SSH1-209ENST00000551165 ADRA1AP35348 466 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 CCR2P41597 374 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 NR1H3Q13133 447 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 TUBB8Q3ZCM7 444 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 C9orf50Q5SZB4 431 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 ACBD5Q5T8D3 534 aaPredicted RBP20.03■□□□□ 0.8
SSH1-209ENST00000551165 BHMTQ93088 406 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 TBL1YQ9BQ87 522 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 PSAT1Q9Y617 370 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 IKBKGQ9Y6K9 419 aa20.03■□□□□ 0.8
SSH1-209ENST00000551165 GRM6O15303 877 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 WDR4P57081 412 aaKnown RBP20.02■□□□□ 0.8
SSH1-209ENST00000551165 GNA12Q03113 381 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 TEX26Q8N6G2 289 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 PHOSPHO2Q8TCD6 241 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 ATP2A3Q93084 1043 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 AZIN2Q96A70 460 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 ZNF669Q96BR6 464 aaPredicted RBP20.02■□□□□ 0.8
SSH1-209ENST00000551165 SMC6Q96SB8 1091 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 SPON2Q9BUD6 331 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 DONSONQ9NYP3 566 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 SAMD15Q9P1V8 674 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 STK39Q9UEW8 545 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 IRAK3Q9Y616 596 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CHD5Q8TDI0 1954 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 GMNCA6NCL1 334 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 TYROBPO43914 113 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 PRAMEF11O60813 436 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 GLUD1P00367 558 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 MYL4P12829 197 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CD86P42081 329 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CLCN4P51793 760 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CDH4P55283 916 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 YBEYP58557 167 aaPredicted RBP20.02■□□□□ 0.8
SSH1-209ENST00000551165 IL10RBQ08334 325 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CDH17Q12864 832 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 RABGAP1LQ5R372 815 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 NAPEPLDQ6IQ20 393 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 CCT8L2Q96SF2 557 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 PDFQ9HBH1 243 aa20.02■□□□□ 0.8
SSH1-209ENST00000551165 ZCWPW2A0A1B0GU75 182 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 TRIM49D1C9J1S8 452 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 ANXA9O76027 345 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 NMBRP28336 390 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 MTA1Q13330 715 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 ZSCAN26Q16670 478 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 QPCTQ16769 361 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 PABPC1LQ4VXU2 614 aaKnown RBP20.01■□□□□ 0.79
SSH1-209ENST00000551165 FSCBQ5H9T9 825 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 IL31Q6EBC2 164 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 KDELC1Q6UW63 502 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 TMEM135Q86UB9 458 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 IMP4Q96G21 291 aaKnown RBP20.01■□□□□ 0.79
SSH1-209ENST00000551165 EMILIN2Q9BXX0 1053 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 SLC25A51Q9H1U9 297 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 TLR9Q9NR96 1032 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 ASB3Q9Y575 518 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 MYLKQ15746 1914 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 FAM47DPA6NHR8 397 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 POLBP06746 335 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 WNT3AP56704 352 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 LBRQ14739 615 aaKnown RBP20.01■□□□□ 0.79
SSH1-209ENST00000551165 POU6F1Q14863 301 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 SLC1A5Q15758 541 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 ANKRD20A4Q4UJ75 823 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 CCDC149Q6ZUS6 474 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 SH2D5Q6ZV89 423 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 TAX1BP1Q86VP1 789 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 DENND1AQ8TEH3 1009 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 GRID1Q9ULK0 1009 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 DENND4CQ5VZ89 1909 aa20.01■□□□□ 0.79
SSH1-209ENST00000551165 CKMP06732 381 aa20■□□□□ 0.79
SSH1-209ENST00000551165 NPY2RP49146 381 aa20■□□□□ 0.79
SSH1-209ENST00000551165 GEMP55040 296 aa20■□□□□ 0.79
SSH1-209ENST00000551165 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
SSH1-209ENST00000551165 RANBP10Q6VN20 620 aa20■□□□□ 0.79
SSH1-209ENST00000551165 ARRDC2Q8TBH0 407 aa20■□□□□ 0.79
SSH1-209ENST00000551165 FATE1Q969F0 183 aa20■□□□□ 0.79
SSH1-209ENST00000551165 TTC17Q96AE7 1141 aa20■□□□□ 0.79
SSH1-209ENST00000551165 TCEAL4Q96EI5 215 aa20■□□□□ 0.79
SSH1-209ENST00000551165 ZNF317Q96PQ6 595 aaPredicted RBP20■□□□□ 0.79
SSH1-209ENST00000551165 LZTS1Q9Y250 596 aa20■□□□□ 0.79
SSH1-209ENST00000551165 IQANK1A0A1B0GTG1 560 aa20■□□□□ 0.79
SSH1-209ENST00000551165 GOLGA8TH3BQL2 631 aa20■□□□□ 0.79
SSH1-209ENST00000551165 NDUFAB1O14561 156 aa20■□□□□ 0.79
SSH1-209ENST00000551165 CLDN11O75508 207 aa20■□□□□ 0.79
SSH1-209ENST00000551165 MT-ND3P03897 115 aa20■□□□□ 0.79
SSH1-209ENST00000551165 SF3A3Q12874 501 aaKnown RBP eCLIP20■□□□□ 0.79
SSH1-209ENST00000551165 MROH9Q5TGP6 573 aa20■□□□□ 0.79
SSH1-209ENST00000551165 Q6ZNB5 142 aa20■□□□□ 0.79
SSH1-209ENST00000551165 CYS1Q717R9 158 aa20■□□□□ 0.79
SSH1-209ENST00000551165 CCNJLQ8IV13 435 aa20■□□□□ 0.79
SSH1-209ENST00000551165 SLC25A41Q8N5S1 370 aa20■□□□□ 0.79
SSH1-209ENST00000551165 MRPS31Q92665 395 aaKnown RBP20■□□□□ 0.79
SSH1-209ENST00000551165 CERS2Q96G23 380 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms