RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 NKX2-4Q9H2Z4 354 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 ELOVL6Q9H5J4 265 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 ACSL4O60488 711 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 CFIP05156 583 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 OCM2P0CE71 109 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
NR4A1-215ENST00000550557 MAMLD1Q13495 774 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 TMEM192Q8IY95 271 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 HIPK4Q8NE63 616 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
NR4A1-215ENST00000550557 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 SERPINB8P50452 374 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 IFI35P80217 286 aaPredicted RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 MGAT5Q09328 741 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 KRT72Q14CN4 511 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 SERINC5Q86VE9 423 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 IRF7Q92985 503 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 AHSPQ9NZD4 102 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ATG13O75143 517 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 GUCA1CO95843 209 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CYBAP13498 195 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 TACR2P21452 398 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CES1P23141 567 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 EEF1B2P24534 225 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 FMO1Q01740 532 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 USP4Q13107 963 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 SLC25A52Q3SY17 297 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 RFWD3Q6PCD5 774 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF614Q8N883 585 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CCDC126Q96EE4 140 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 RUVBL2Q9Y230 463 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 COL16A1Q07092 1604 aaPredicted RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CHD4Q14839 1912 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 NWD2Q9ULI1 1742 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 GNG14A0A1W2PPG7 69 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 USP12O75317 370 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 UGT2B4P06133 528 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 RBP1P09455 135 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ELP6Q0PNE2 266 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CATSPER1Q8NEC5 780 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 HNRNPABQ99729 332 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 MRGBPQ9NV56 204 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 PIH1D1Q9NWS0 290 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CACNA2D2Q9NY47 1150 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 FAM32AQ9Y421 112 aaKnown RBP12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ATP4AP20648 1035 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 RBL1P28749 1068 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 GLRBP48167 497 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 NOMO3P69849 1222 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 HSPA14Q0VDF9 509 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CSHL1Q14406 222 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 KLHL35Q6PF15 583 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 HOMEZQ8IX15 550 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 ELMO1Q92556 727 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 PHTF1Q9UMS5 762 aa12.36□□□□□ -0.43
NR4A1-215ENST00000550557 H3BMM5 538 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 STBD1O95210 358 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ERBB2P04626 1255 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 DHPSP49366 369 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ANXA11P50995 505 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 NCALDP61601 193 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 LVRNQ6Q4G3 990 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 GRASPQ7Z6J2 395 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 RASGEF1CQ8N431 466 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF655Q8N720 491 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 MRPL46Q9H2W6 279 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 DTNAQ9Y4J8 743 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 A0A088AWK7 358 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 MGAT4DA6NG13 374 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF865P0CJ78 1059 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF10P21506 573 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 TARSP26639 723 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ITGA9Q13797 1035 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PDGFRLQ15198 375 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PRCCQ92733 491 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms