RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 FBXL12Q9NXK8 326 aa6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 UVRAGQ9P2Y5 699 aa6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 FCF1Q9Y324 198 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 PCDHA13Q9Y5I0 950 aa6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 EPN1Q9Y6I3 576 aaPredicted RBP6.62□□□□□ -1.35
TMEM106C-215ENST00000550552 CEP250Q9BV73 2442 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ATXN2Q99700 1313 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CXorf51AA0A1B0GTR3 108 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 A0A1W2PP55 124 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 TMEM110-MUSTN1A8MSY1 372 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 DAPK3O43293 454 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 BUB1O43683 1085 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 RNASEH1O60930 286 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 RNASEH2AO75792 299 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 MTA2O94776 668 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 IGHV4-34P06331 123 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 C5AR1P21730 350 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 GKP32189 559 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CHRNA3P32297 505 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ETFBP38117 255 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 MAGEA1P43355 309 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PSMD8P48556 350 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CLCN6P51797 869 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CNTN1Q12860 1018 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 MMRN1Q13201 1228 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 MESDQ14696 234 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CYTH1Q15438 398 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PARP15Q460N3 678 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CARD16Q5EG05 197 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ARSIQ5FYB1 569 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ATXN7L2Q5T6C5 722 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 LYSMD4Q5XG99 296 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 C22orf39Q6P5X5 142 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 RAD9BQ6WBX8 426 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PRR23CQ6ZRP0 262 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 USP30Q70CQ3 517 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CYP2U1Q7Z449 544 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 TMEM139Q8IV31 216 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PLPP6Q8IY26 295 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CCDC170Q8IYT3 715 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 HDDC3Q8N4P3 179 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 GPR161Q8N6U8 529 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 SPC24Q8NBT2 197 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 TMIEQ8NEW7 156 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PIP4K2CQ8TBX8 421 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 GANCQ8TET4 914 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 OR8D1Q8WZ84 308 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 FAM131CQ96AQ9 280 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ISG20Q96AZ6 181 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 BIRC7Q96CA5 298 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CSPG4P5Q96PW8 444 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CEP44Q9C0F1 390 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 BTBD1Q9H0C5 482 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 CATSPERBQ9H7T0 1116 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 EBF2Q9HAK2 575 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 PDFQ9HBH1 243 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 VPS45Q9NRW7 570 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 INTUQ9ULD6 942 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 HPCAL4Q9UM19 191 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 SCML1Q9UN30 329 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 REXO2Q9Y3B8 237 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 HYOU1Q9Y4L1 999 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 WASF2Q9Y6W5 498 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 DUSP10Q9Y6W6 482 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 GON4LQ3T8J9 2241 aa6.61□□□□□ -1.35
TMEM106C-215ENST00000550552 A0A0U1RQJ8 604 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 LNP1A1A4G5 178 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 FAM47DPA6NHR8 397 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 C3orf70A6NLC5 250 aaPredicted RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 H3BRJ5 948 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 DFFAO00273 331 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 CDX4O14627 284 aaPredicted RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 WNT9AO14904 365 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 ALOX15BO15296 676 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 PRAMEF11O60813 436 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 LEFTY1O75610 366 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 TMCC1O94876 653 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 NDUFA10O95299 355 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 SEMA4FO95754 770 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 PEX11BO96011 259 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 ADH1BP00325 375 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 CDC25BP30305 580 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 MAN1A1P33908 653 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 SSR1P43307 286 aaKnown RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 CCNHP51946 323 aaPredicted RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 ZNF135P52742 658 aaPredicted RBP6.6□□□□□ -1.35
TMEM106C-215ENST00000550552 CDH6P55285 790 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms