RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 MAB21L3Q8N8X9 362 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 CDKL2Q92772 493 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
CACNB3-217ENST00000550483 TTC17Q96AE7 1141 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 TMA16Q96EY4 203 aaKnown RBP12.8□□□□□ -0.36
CACNB3-217ENST00000550483 SIGLEC10Q96LC7 697 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 PRICKLE1Q96MT3 831 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-217ENST00000550483 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
CACNB3-217ENST00000550483 SMPD4Q9NXE4 827 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 SEPT3Q9UH03 358 aa12.8□□□□□ -0.36
CACNB3-217ENST00000550483 NOVA2Q9UNW9 492 aaKnown RBP12.8□□□□□ -0.36
CACNB3-217ENST00000550483 SLC9A3R1O14745 358 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 GREM1O60565 184 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 LUC7L3O95232 432 aaKnown RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 PEX11BO96011 259 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 POLBP06746 335 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 IRF1P10914 325 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 BMP1P13497 986 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 PPP2R2AP63151 447 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 CYP4F8P98187 520 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 LBRQ14739 615 aaKnown RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 DUSP6Q16828 381 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 SPANXN3Q5MJ09 141 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 GPR158Q5T848 1215 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 IL31Q6EBC2 164 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 ALG1LQ6GMV1 187 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 RFWD3Q6PCD5 774 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 POTEHQ6S545 545 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 DNAAF3Q8N9W5 541 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 GABPB2Q8TAK5 448 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 EPS8L3Q8TE67 593 aaKnown RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 PABPC5Q96DU9 382 aaKnown RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 IMP4Q96G21 291 aaKnown RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 LRFN3Q9BTN0 628 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 FSD1LQ9BXM9 530 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 ACE2Q9BYF1 805 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 SFXN1Q9H9B4 322 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 PDFQ9HBH1 243 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 CFAP97Q9P2B7 532 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-217ENST00000550483 RABGEF1Q9UJ41 708 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 ZNF180Q9UJW8 692 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 MAD1L1Q9Y6D9 718 aa12.79□□□□□ -0.36
CACNB3-217ENST00000550483 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 FAM237BA0A1B0GVD1 139 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 SRRM3A6NNA2 597 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 H0Y626 953 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 LEFTY2O00292 366 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 USP1O94782 785 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 EPOP01588 193 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 HLA-DQB2P05538 268 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 CNTFP26441 200 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 IRS1P35568 1242 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 MSH2P43246 934 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 SERPINB9P50453 376 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 IRAK1P51617 712 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 RPS24P62847 133 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 GAD2Q05329 585 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 CDH18Q13634 790 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 LONRF1Q17RB8 773 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 INO80DQ53TQ3 878 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 RNF43Q68DV7 783 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 ARHGAP36Q6ZRI8 547 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 DCAF4L2Q8NA75 395 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 ACDQ96AP0 544 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 PSKH2Q96QS6 385 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 TBL1YQ9BQ87 522 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 DHRS4Q9BTZ2 278 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 MLPHQ9BV36 600 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 CEP41Q9BYV8 373 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 TLE6Q9H808 572 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 SLC28A3Q9HAS3 691 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 ATP13A1Q9HD20 1204 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 SSU72Q9NP77 194 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
CACNB3-217ENST00000550483 DNMT3BQ9UBC3 853 aaKnown RBP12.78□□□□□ -0.36
CACNB3-217ENST00000550483 PRRC2BQ5JSZ5 2229 aaKnown RBP12.77□□□□□ -0.36
CACNB3-217ENST00000550483 TBL1XO60907 577 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms