RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PLRG1O43660 514 aaKnown RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 ATP9BO43861 1147 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 CLDN11O75508 207 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 DAB1O75553 588 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 RFPL3O75679 317 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3HP0C7X1 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 VAV1P15498 845 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 DRD3P35462 400 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 HNF1BP35680 557 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ACADVLP49748 655 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 SNX16P57768 344 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PPP2CBP62714 309 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PPP2CAP67775 309 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ZNF177Q13360 481 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 ILKQ13418 452 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 AUHQ13825 339 aaKnown RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 NUMA1Q14980 2115 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TAF5Q15542 800 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 C5orf22Q49AR2 442 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3GQ6DHY5 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3CQ6IPX1 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 FBXL22Q6P050 247 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 OLFML1Q6UWY5 402 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 GBP6Q6ZN66 633 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 LRRC69Q6ZNQ3 347 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 C11orf57Q6ZUT1 292 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 SLC26A9Q7LBE3 791 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 KANSL1Q7Z3B3 1105 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TRIM69Q86WT6 500 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ZDHHC17Q8IUH5 632 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3Q8IZP1 549 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 DEFB106AQ8N104 65 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 WDTC1Q8N5D0 677 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 LSM14AQ8ND56 463 aaKnown RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 ZNF397Q8NF99 534 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 SHC3Q92529 594 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TSC1Q92574 1164 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 RNF34Q969K3 372 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 NXPE2Q96DL1 559 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ALG14Q96F25 216 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PPP1R13BQ96KQ4 1090 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 FCRL3Q96P31 734 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 CPXM1Q96SM3 734 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 FEM1AQ9BSK4 669 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TMEM51Q9NW97 253 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ARHGAP20Q9P2F6 1191 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 RWDD2AQ9UIY3 292 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 SLC25A13Q9UJS0 675 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 HS3ST2Q9Y278 367 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D30Q9Y2I9 924 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 SYNJ2BP-COX16A0A087WUM0 186 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 GTPBP10A4D1E9 387 aaKnown RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 PRAMEF26H0Y7S4 382 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 RTN2O75298 545 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 SLC9A1P19634 815 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 NOS2P35228 1153 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 USP8P40818 1118 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 METAP1P53582 386 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 CDH4P55283 916 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 CENPCQ03188 943 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 PTK2Q05397 1052 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 DNAJC3Q13217 504 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 STAT4Q14765 748 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 ARHGAP44Q17R89 818 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 EXOC3L4Q17RC7 722 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 ACCSLQ4AC99 568 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 SETMARQ53H47 684 aaPredicted RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 PRAMEF14Q5SWL7 426 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 AGBL4Q5VU57 503 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 NEK5Q6P3R8 708 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 GJB7Q6PEY0 223 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 FAM183BPQ6ZVS7 135 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 Q6ZVU0 165 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 SPATS2Q86XZ4 545 aaKnown RBP7.82□□□□□ -1.16
NEK3-201ENST00000550331 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 EID2Q8N6I1 236 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 CCDC114Q96M63 670 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 CRACR2AQ9BSW2 395 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 PREBQ9HCU5 417 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 ARHGEF38Q9NXL2 777 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 RRN3Q9NYV6 651 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 COX16Q9P0S2 106 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 VPS28Q9UK41 221 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 SARDHQ9UL12 918 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 VANGL2Q9ULK5 521 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 OR51B4Q9Y5P0 310 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 HS3ST4Q9Y661 456 aa7.82□□□□□ -1.16
NEK3-201ENST00000550331 MGAQ8IWI9 3026 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CAPN8A6NHC0 703 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 M0QYT0 321 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 RRP8O43159 456 aaKnown RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 TLX3O43711 291 aaPredicted RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 PAGE1O75459 146 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 GRAP2O75791 330 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 ERBB2P04626 1255 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms