RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 WDR59Q6PJI9 974 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 LRRC31Q6UY01 552 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 MON1BQ7L1V2 547 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 GLRX5Q86SX6 157 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 KDF1Q8NAX2 398 aaPredicted RBP16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ADAMTS14Q8WXS8 1223 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 BAP1Q92560 729 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ACE2Q9BYF1 805 aaPredicted RBP16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ZYG11BQ9C0D3 744 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ADAM22Q9P0K1 906 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 OR12D3Q9UGF7 316 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 PCDHGB2Q9Y5G2 931 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 WASF2Q9Y6W5 498 aa16.27■□□□□ 0.2
COX6A1-203ENST00000550009 ADAMTS20P59510 1910 aa16.27■□□□□ 0.19
COX6A1-203ENST00000550009 LRRC10BA6NIK2 292 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 SLC31A1O15431 190 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 FLRT2O43155 660 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 CCP110O43303 1012 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 ATMINO43313 823 aaPredicted RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 RNGTTO60942 597 aaKnown RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 LEFTY1O75610 366 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 LRIG2O94898 1065 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 CDK11BP21127 795 aaKnown RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 OXCT1P55809 520 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 NXPH1P58417 271 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 KRT83P78385 493 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 GNA12Q03113 381 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 DNAJC3Q13217 504 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 FGL2Q14314 439 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 SEL1L3Q68CR1 1132 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 RWDD4Q6NW29 188 aaKnown RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 ARCQ7LC44 396 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 CENPIQ92674 756 aaPredicted RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 ELF4Q99607 663 aaPredicted RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 AGPAT1Q99943 283 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 SYT11Q9BT88 431 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 C2orf49Q9BVC5 232 aaPredicted RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 NOL6Q9H6R4 1146 aaKnown RBP16.26■□□□□ 0.19
COX6A1-203ENST00000550009 ATP13A1Q9HD20 1204 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 GGT7Q9UJ14 662 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 ITPR1Q14643 2758 aa16.26■□□□□ 0.19
COX6A1-203ENST00000550009 A0A1W2PQU0 124 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 ILVBLA1L0T0 632 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 FAM221BA6H8Z2 402 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 TMCO5BA8MYB1 307 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 TLR4O00206 839 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 SDC3O75056 442 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 DKK1O94907 266 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 PLEKP08567 350 aaPredicted RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 KRT3P12035 628 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 SDC4P31431 198 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 SERPINH1P50454 418 aaKnown RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 DNA2P51530 1060 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 CLDN2P57739 230 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 C6orf118Q5T5N4 469 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 LRSAM1Q6UWE0 723 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 PHF13Q86YI8 300 aaPredicted RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 MSANTD4Q8NCY6 345 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 SAP25Q8TEE9 199 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 ZCCHC14Q8WYQ9 949 aaKnown RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
COX6A1-203ENST00000550009 GPATCH2LQ9NWQ4 482 aa16.25■□□□□ 0.19
COX6A1-203ENST00000550009 PKD1L2Q7Z442 2459 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 SRRM3A6NNA2 597 aaPredicted RBP16.24■□□□□ 0.19
COX6A1-203ENST00000550009 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ALOX15BO15296 676 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 PCDHGA12O60330 932 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 TPM2P07951 284 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 GPD1P21695 349 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 PTPN9P43378 593 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
COX6A1-203ENST00000550009 SCAPQ12770 1279 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ZNF284Q2VY69 593 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 LRRC73Q5JTD7 316 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 PPP1R15BQ5SWA1 713 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ATXN7L2Q5T6C5 722 aaPredicted RBP16.24■□□□□ 0.19
COX6A1-203ENST00000550009 FAM46CQ5VWP2 391 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 NAPEPLDQ6IQ20 393 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 KANSL1Q7Z3B3 1105 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 DSG4Q86SJ6 1040 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 TRIM69Q86WT6 500 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 EID2Q8N6I1 236 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 MDM1Q8TC05 714 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 MCEEQ96PE7 176 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 SELENOOQ9BVL4 669 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 TRIM7Q9C029 511 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 PPARGC1AQ9UBK2 798 aaKnown RBP16.24■□□□□ 0.19
COX6A1-203ENST00000550009 IL36AQ9UHA7 158 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ITM2BQ9Y287 266 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ASXL3Q9C0F0 2248 aa16.24■□□□□ 0.19
COX6A1-203ENST00000550009 ANKRD11Q6UB99 2663 aaPredicted RBP16.24■□□□□ 0.19
COX6A1-203ENST00000550009 RAD51BO15315 384 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 ITIH2P19823 946 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 CCNHP51946 323 aaPredicted RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 HNRNPDQ14103 355 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms