RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 VPS45Q9NRW7 570 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SEPT3Q9UH03 358 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 TEX264Q9Y6I9 313 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 VCANP13611 3396 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 A0A0D9SEW6 157 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 SCAMP3O14828 347 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 MAGEA3P43357 314 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 GEMIN4P57678 1058 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZNF844Q08AG5 666 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 MPP3Q13368 585 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZNF235Q14590 738 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 KRT71Q3SY84 523 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 MSS51Q4VC12 460 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ATAT1Q5SQI0 421 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 OTOP3Q7RTS5 596 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ANKMY2Q8IV38 441 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 FIBINQ8TAL6 211 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ING5Q8WYH8 240 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 SIGLEC10Q96LC7 697 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZSWIM3Q96MP5 696 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 FEM1AQ9BSK4 669 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 MLPHQ9BV36 600 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 LRRC4CQ9HCJ2 640 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 NT5MQ9NPB1 228 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 GDE1Q9NZC3 331 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 CCL26Q9Y258 94 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 TTLL3Q9Y4R7 772 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 DOCK6Q96HP0 2047 aa13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 NYNRINQ9P2P1 1898 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-214ENST00000549613 CXorf51AA0A1B0GTR3 108 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 MAGEB16A2A368 324 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 F5H423 210 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 RASGRF2O14827 1237 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 TCEA3O75764 348 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 PRAMEF12O95522 483 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 ADAM15Q13444 863 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 CBX2Q14781 532 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 HP1BP3Q5SSJ5 553 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 FAM182AQ5T1J6 154 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 AGBL2Q5U5Z8 902 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 FYB2Q5VWT5 728 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 ARMC3Q5W041 872 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 CES5AQ6NT32 575 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 TPGS1Q6ZTW0 290 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 C3orf62Q6ZUJ4 267 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZNF534Q76KX8 674 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 METTL3Q86U44 580 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 DNAAF3Q8N9W5 541 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 DCAF4L2Q8NA75 395 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 OR2W6PQ8NHA6 318 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 IRF7Q92985 503 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 ACDQ96AP0 544 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 IMP4Q96G21 291 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 EBNA1BP2Q99848 306 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 C2orf49Q9BVC5 232 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 CINPQ9BW66 212 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 STMN4Q9H169 189 aaPredicted RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 CASS4Q9NQ75 786 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 SPHK2Q9NRA0 654 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 OBP2AQ9NY56 170 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZC3H7BQ9UGR2 993 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 VPS28Q9UK41 221 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 CHMP2BQ9UQN3 213 aa13.92□□□□□ -0.18
CALCOCO1-214ENST00000549613 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 CBX4O00257 560 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 AVILO75366 819 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 CSKP41240 450 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 PLK1P53350 603 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SESN2P58004 480 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SLC20A2Q08357 652 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 CDH17Q12864 832 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SPARCL1Q14515 664 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 FASTKD3Q14CZ7 662 aaKnown RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SLC14A2Q15849 920 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 NPAS3Q8IXF0 933 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 OR52K2Q8NGK3 314 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 UHMK1Q8TAS1 419 aaKnown RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 SMARCD2Q92925 531 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 STAMBPL1Q96FJ0 436 aa13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO1-214ENST00000549613 TBL1YQ9BQ87 522 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms