RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 A0A1W2PQM1 296 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 C2CD4BA6NLJ0 364 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 TNPO2O14787 897 aaKnown RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 PER2O15055 1255 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 SPTLC2O15270 562 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 RTN3O95197 1032 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 PRKCGP05129 697 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 URODP06132 367 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 CHRM4P08173 479 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 EPHA8P29322 1005 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 MAN1A1P33908 653 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 GGT5P36269 586 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 STAT1P42224 750 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 CASP2P42575 452 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 CDH15P55291 814 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 LMOD3Q0VAK6 560 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 PGM5Q15124 567 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 RPE65Q16518 533 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 SLC18A3Q16572 532 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 AP5B1Q2VPB7 878 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ARL13AQ5H913 290 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 C17orf99Q6UX52 265 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF782Q6ZMW2 699 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF66Q6ZN08 573 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ADGRG6Q86SQ4 1221 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 SCAIQ8N9R8 606 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 TDRD7Q8NHU6 1098 aaKnown RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 NFKBIDQ8NI38 313 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 OSR1Q8TAX0 266 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ADAMTS15Q8TE58 950 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 DPF1Q92782 380 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 KAT2BQ92831 832 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 LBHD1Q9BQE6 289 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 PIMREGQ9BSJ6 248 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 CADM1Q9BY67 442 aaKnown RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 EPHX3Q9H6B9 360 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ALKBH4Q9NXW9 302 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ZNHIT2Q9UHR6 403 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 FBXO4Q9UKT5 387 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 SHANK2Q9UPX8 1470 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 FAM135AQ9P2D6 1515 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 GPATCH8Q9UKJ3 1502 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TCRBV7S3A2A0A539 114 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TMEM247A6NEH6 219 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TNFSF14O43557 240 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 AKAP8O43823 692 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 USO1O60763 962 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 NPHP4O75161 1426 aaPredicted RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 USP12O75317 370 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 RNF8O76064 485 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 FCGR2AP12318 317 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 SLC12A2P55011 1212 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 DCAF7P61962 342 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 SLC10A2Q12908 348 aaPredicted RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 FOXF2Q12947 444 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 NAA25Q14CX7 972 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TSTQ16762 297 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TMEM119Q4V9L6 283 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 GPATCH4Q5T3I0 446 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 PTF1AQ7RTS3 328 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TMEM217Q8N7C4 229 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 CNOT9Q92600 299 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 KAT2AQ92830 837 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 SORCS2Q96PQ0 1159 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 NR1H4Q96RI1 486 aaPredicted RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TTYH1Q9H313 450 aaPredicted RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 MOV10Q9HCE1 1003 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 OLA1Q9NTK5 396 aaKnown RBP4.42□□□□□ -1.7
PTCH1-216ENST00000548379 FBXO40Q9UH90 709 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 ICKQ9UPZ9 632 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 TNFSF13BQ9Y275 285 aa4.42□□□□□ -1.7
PTCH1-216ENST00000548379 SYCP2Q9BX26 1530 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 CEP170BQ9Y4F5 1589 aaPredicted RBP4.41□□□□□ -1.7
PTCH1-216ENST00000548379 RTEL1-TNFRSF6BF6WH68 1400 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 MST1RQ04912 1400 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 MIA2Q96PC5 1412 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 OR6C68A6NDL8 312 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
PTCH1-216ENST00000548379 DDAH2O95865 285 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 TUBB4AP04350 444 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 LCKP06239 509 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 PTPN9P43378 593 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 CCR9P51686 369 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 TDGQ13569 410 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 PKP1Q13835 747 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 C5orf22Q49AR2 442 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 FBXO43Q4G163 708 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 FAM69AQ5T7M9 428 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 STRIP1Q5VSL9 837 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms