RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 TUBB3Q13509 450 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 NPWQ8N729 165 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 LY75O60449 1722 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 BRCA2P51587 3418 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 MCM3APO60318 1980 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 AURKAO14965 403 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 CRCPO75575 148 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 FAM200BP0CF97 657 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 SOX4Q06945 474 aaPredicted RBP13.19□□□□□ -0.3
BRF1-210ENST00000547374 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 PDCD6IPQ8WUM4 868 aaKnown RBP13.19□□□□□ -0.3
BRF1-210ENST00000547374 LRTOMTQ8WZ04 291 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 GPAMQ9HCL2 828 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 FZD10Q9ULW2 581 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
BRF1-210ENST00000547374 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 STMN1P16949 149 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 IL23RQ5VWK5 629 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 SCIMPQ6UWF3 145 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 DCBLD1Q8N8Z6 715 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 GRIN3AQ8TCU5 1115 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 WNT8BQ93098 351 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 DMAP1Q9NPF5 467 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 MPP6Q9NZW5 540 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 IGKV6-21A0A0C4DH24 114 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 NCF1BA6NI72 391 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 NCF1CA8MVU1 366 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 H3BSA7 217 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 TIPRLO75663 272 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 MYL3P08590 195 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 NCF1P14598 390 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 UGT1A6P19224 532 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 EPHX2P34913 555 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ADRA1BP35368 520 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 SCNN1BP51168 640 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 GALK1P51570 392 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 LIMK2P53671 638 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 BEX3Q00994 111 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 FAM83EQ2M2I3 478 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ARL13BQ3SXY8 428 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 SLC27A1Q6PCB7 646 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 JADE3Q92613 823 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 FBRSL1Q9HCM7 1045 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 UBAP1Q9NZ09 502 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ZNF711Q9Y462 761 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 FAM95CA0A1B0GW59 222 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 DDHD2O94830 711 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 CLIC3O95833 236 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 NIPAL4Q0D2K0 466 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 OSTM1Q86WC4 334 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 PSMD13Q9UNM6 376 aa13.18□□□□□ -0.3
BRF1-210ENST00000547374 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
BRF1-210ENST00000547374 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRF1-210ENST00000547374 SOCS7O14512 581 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 AHSGP02765 367 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 PSMC3P17980 439 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 CES1P23141 567 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 SDHAF4Q5VUM1 108 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 TIMM44O43615 452 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 BDNFP23560 247 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 ARPP19P56211 112 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 EPGNQ6UW88 154 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 CYGBQ8WWM9 190 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 NAT9Q9BTE0 207 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 CCNT2O60583 730 aaKnown RBP13.17□□□□□ -0.3
BRF1-210ENST00000547374 NOS2P35228 1153 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms