RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SMAD6O43541 496 aaKnown RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 PLXNA2O75051 1894 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 RHOCP08134 193 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 JUPP14923 745 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 CYP11B1P15538 503 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 PTPRBP23467 1997 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 RRM1P23921 792 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 CHRNA3P32297 505 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 CDH5P33151 784 aaPredicted RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 GABRB2P47870 512 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 ARRB1P49407 418 aaPredicted RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 ACADVLP49748 655 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 SNX16P57768 344 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 KRT83P78385 493 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 DEUP1Q05D60 604 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 STAT4Q14765 748 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 AGERQ15109 404 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 C2CD6Q53TS8 623 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 HSP90AA4PQ58FG1 418 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 BRMS1LQ5PSV4 323 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 PIP5KL1Q5T9C9 394 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 TRNP1Q6NT89 227 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 BPHLQ86WA6 291 aaPredicted RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 TMPRSS12Q86WS5 348 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 TRIM69Q86WT6 500 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 XYLT1Q86Y38 959 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 ZDHHC17Q8IUH5 632 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 ATP11CQ8NB49 1132 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 CHST14Q8NCH0 376 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 TMEM35BQ8NCS4 154 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 OR2A12Q8NGT7 310 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 KLK6Q92876 244 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 ARRDC3Q96B67 414 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 C18orf8Q96DM3 657 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 PGAP3Q96FM1 320 aaPredicted RBP8.67□□□□□ -1.02
USP28-215ENST00000545608 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 RRN3Q9NYV6 651 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 MPP6Q9NZW5 540 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 VPS51Q9UID3 782 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 STAP1Q9ULZ2 295 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 DMTF1Q9Y222 760 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 HS3ST2Q9Y278 367 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
USP28-215ENST00000545608 ACACAQ13085 2346 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 URB1O60287 2271 aaKnown RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 KNTC1P50748 2209 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 A0A1W2PQU0 124 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 PRAMEF26H0Y7S4 382 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 KPNA3O00505 521 aaPredicted RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 SLC31A1O15431 190 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 MAGEC1O60732 1142 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 RNGTTO60942 597 aaKnown RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 SDC3O75056 442 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 RFPL3O75679 317 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 F9P00740 461 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 C1SP09871 688 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 GLDCP23378 1020 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 NUDT1P36639 197 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 FLT3P36888 993 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 BPIFB4P59827 614 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 OVGP1Q12889 678 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 DPCR1Q3MIW9 517 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 SLC25A52Q3SY17 297 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 SOWAHCQ53LP3 525 aaPredicted RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 FAM102AQ5T9C2 384 aaPredicted RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 FBXL19Q6PCT2 694 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 LINGO4Q6UY18 593 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 BNIPLQ7Z465 357 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TFAP2DQ7Z6R9 452 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 SETD3Q86TU7 594 aaPredicted RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 IQCHQ86VS3 1027 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 FAM114A1Q8IWE2 563 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 OXR1Q8N573 874 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 DCAF4L2Q8NA75 395 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 OR7D4Q8NG98 312 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 C1orf74Q96LT6 269 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 MYOCQ99972 504 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TUBGCP2Q9BSJ2 902 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 NAA15Q9BXJ9 866 aaKnown RBP8.66□□□□□ -1.02
USP28-215ENST00000545608 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 PREBQ9HCU5 417 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
USP28-215ENST00000545608 ADAMTS20P59510 1910 aa8.65□□□□□ -1.02
USP28-215ENST00000545608 IGLV3-10A0A075B6K4 115 aa8.65□□□□□ -1.02
USP28-215ENST00000545608 E9PAM4 449 aa8.65□□□□□ -1.02
USP28-215ENST00000545608 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
USP28-215ENST00000545608 TRIM38O00635 465 aa8.65□□□□□ -1.02
USP28-215ENST00000545608 SRGAP2O75044 1071 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms