RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CPED1A4D0V7 1026 aa15.07■□□□□ 0
RTN3-214ENST00000545432 RAD51BO15315 384 aa15.07■□□□□ 0
RTN3-214ENST00000545432 AP1G1O43747 822 aa15.07■□□□□ 0
RTN3-214ENST00000545432 CLDN11O75508 207 aa15.07■□□□□ 0
RTN3-214ENST00000545432 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
RTN3-214ENST00000545432 PRNPP04156 253 aa15.07■□□□□ 0
RTN3-214ENST00000545432 NTRK1P04629 796 aa15.07■□□□□ 0
RTN3-214ENST00000545432 SFTPCP11686 197 aa15.07■□□□□ 0
RTN3-214ENST00000545432 RABIFP47224 123 aa15.07■□□□□ 0
RTN3-214ENST00000545432 CLCN6P51797 869 aa15.07■□□□□ 0
RTN3-214ENST00000545432 INHBCP55103 352 aa15.07■□□□□ 0
RTN3-214ENST00000545432 PFN3P60673 137 aa15.07■□□□□ 0
RTN3-214ENST00000545432 DNM1Q05193 864 aaKnown RBP15.07■□□□□ 0
RTN3-214ENST00000545432 LRMPQ12912 555 aa15.07■□□□□ 0
RTN3-214ENST00000545432 KIAA1161Q6NSJ0 714 aa15.07■□□□□ 0
RTN3-214ENST00000545432 ZNF574Q6ZN55 896 aaPredicted RBP15.07■□□□□ 0
RTN3-214ENST00000545432 KAT5Q92993 513 aa15.07■□□□□ 0
RTN3-214ENST00000545432 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
RTN3-214ENST00000545432 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
RTN3-214ENST00000545432 PCDHB4Q9Y5E5 795 aa15.07■□□□□ 0
RTN3-214ENST00000545432 HEMK1Q9Y5R4 338 aaPredicted RBP15.07■□□□□ 0
RTN3-214ENST00000545432 TRPM6Q9BX84 2022 aa15.07■□□□□ 0
RTN3-214ENST00000545432 H3BM21 787 aa15.06■□□□□ 0
RTN3-214ENST00000545432 SPINT1O43278 529 aa15.06■□□□□ 0
RTN3-214ENST00000545432 ZNF821O75541 412 aaPredicted RBP15.06■□□□□ 0
RTN3-214ENST00000545432 GJB6O95452 261 aa15.06■□□□□ 0
RTN3-214ENST00000545432 PAK4O96013 591 aaPredicted RBP15.06■□□□□ 0
RTN3-214ENST00000545432 NUMBP49757 651 aa15.06■□□□□ 0
RTN3-214ENST00000545432 IRAK1P51617 712 aa15.06■□□□□ 0
RTN3-214ENST00000545432 RPS21P63220 83 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 FKBP3Q00688 224 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 EIF2B5Q13144 721 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 EIF3IQ13347 325 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 AUHQ13825 339 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 NR0B2Q15466 257 aa15.06■□□□□ 0
RTN3-214ENST00000545432 ZSCAN23Q3MJ62 389 aa15.06■□□□□ 0
RTN3-214ENST00000545432 TPRG1LQ5T0D9 272 aa15.06■□□□□ 0
RTN3-214ENST00000545432 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
RTN3-214ENST00000545432 OR6B2Q6IFH4 312 aa15.06■□□□□ 0
RTN3-214ENST00000545432 CHST14Q8NCH0 376 aa15.06■□□□□ 0
RTN3-214ENST00000545432 BTN2A2Q8WVV5 523 aa15.06■□□□□ 0
RTN3-214ENST00000545432 NAT6Q93015 286 aa15.06■□□□□ 0
RTN3-214ENST00000545432 SGF29Q96ES7 293 aa15.06■□□□□ 0
RTN3-214ENST00000545432 FEM1CQ96JP0 617 aa15.06■□□□□ 0
RTN3-214ENST00000545432 SLC2A13Q96QE2 648 aa15.06■□□□□ 0
RTN3-214ENST00000545432 MED15Q96RN5 788 aa15.06■□□□□ 0
RTN3-214ENST00000545432 METTL14Q9HCE5 456 aaKnown RBP15.06■□□□□ 0
RTN3-214ENST00000545432 VPS28Q9UK41 221 aa15.06■□□□□ 0
RTN3-214ENST00000545432 FADS3Q9Y5Q0 445 aa15.06■□□□□ 0
RTN3-214ENST00000545432 WASF2Q9Y6W5 498 aa15.06■□□□□ 0
RTN3-214ENST00000545432 COL12A1Q99715 3063 aa15.06■□□□□ 0
RTN3-214ENST00000545432 K7ERQ8 282 aa15.05■□□□□ -0
RTN3-214ENST00000545432 KPNA3O00505 521 aaPredicted RBP15.05■□□□□ -0
RTN3-214ENST00000545432 CASC3O15234 703 aaKnown RBP15.05■□□□□ -0
RTN3-214ENST00000545432 SMAD6O43541 496 aaKnown RBP15.05■□□□□ -0
RTN3-214ENST00000545432 PCDH8O95206 1070 aa15.05■□□□□ -0
RTN3-214ENST00000545432 CALCAP01258 141 aa15.05■□□□□ -0
RTN3-214ENST00000545432 GLI1P08151 1106 aa15.05■□□□□ -0
RTN3-214ENST00000545432 CCR1P32246 355 aa15.05■□□□□ -0
RTN3-214ENST00000545432 SYKP43405 635 aa15.05■□□□□ -0
RTN3-214ENST00000545432 RPIAP49247 311 aa15.05■□□□□ -0
RTN3-214ENST00000545432 FMO5P49326 533 aa15.05■□□□□ -0
RTN3-214ENST00000545432 NDUFA8P51970 172 aa15.05■□□□□ -0
RTN3-214ENST00000545432 CDH4P55283 916 aa15.05■□□□□ -0
RTN3-214ENST00000545432 GCNT1Q02742 428 aa15.05■□□□□ -0
RTN3-214ENST00000545432 DEFB133Q30KQ1 61 aa15.05■□□□□ -0
RTN3-214ENST00000545432 FOXD4L6Q3SYB3 417 aaPredicted RBP15.05■□□□□ -0
RTN3-214ENST00000545432 DCAF17Q5H9S7 520 aaPredicted RBP15.05■□□□□ -0
RTN3-214ENST00000545432 C6orf132Q5T0Z8 1188 aa15.05■□□□□ -0
RTN3-214ENST00000545432 ARTNQ5T4W7 220 aa15.05■□□□□ -0
RTN3-214ENST00000545432 FOXD4L3Q6VB84 417 aaPredicted RBP15.05■□□□□ -0
RTN3-214ENST00000545432 KRBA2Q6ZNG9 492 aa15.05■□□□□ -0
RTN3-214ENST00000545432 SLC35F3Q8IY50 421 aa15.05■□□□□ -0
RTN3-214ENST00000545432 CCDC114Q96M63 670 aa15.05■□□□□ -0
RTN3-214ENST00000545432 RPRD1AQ96P16 312 aaPredicted RBP15.05■□□□□ -0
RTN3-214ENST00000545432 NT5C1BQ96P26 610 aa15.05■□□□□ -0
RTN3-214ENST00000545432 TRIM4Q9C037 500 aa15.05■□□□□ -0
RTN3-214ENST00000545432 ASNSD1Q9NWL6 643 aa15.05■□□□□ -0
RTN3-214ENST00000545432 CLEC18AA5D8T8 446 aa15.04■□□□□ -0
RTN3-214ENST00000545432 LMO7DNF2Z398 122 aa15.04■□□□□ -0
RTN3-214ENST00000545432 PLD2O14939 933 aa15.04■□□□□ -0
RTN3-214ENST00000545432 NVLO15381 856 aaKnown RBP15.04■□□□□ -0
RTN3-214ENST00000545432 P4HA2O15460 535 aa15.04■□□□□ -0
RTN3-214ENST00000545432 GCATO75600 419 aa15.04■□□□□ -0
RTN3-214ENST00000545432 JUNDP17535 347 aa15.04■□□□□ -0
RTN3-214ENST00000545432 SLC5A2P31639 672 aa15.04■□□□□ -0
RTN3-214ENST00000545432 UGT1A5P35504 534 aa15.04■□□□□ -0
RTN3-214ENST00000545432 NEK3P51956 506 aa15.04■□□□□ -0
RTN3-214ENST00000545432 KRT83P78385 493 aa15.04■□□□□ -0
RTN3-214ENST00000545432 CENPCQ03188 943 aa15.04■□□□□ -0
RTN3-214ENST00000545432 TAF5Q15542 800 aa15.04■□□□□ -0
RTN3-214ENST00000545432 ARSIQ5FYB1 569 aa15.04■□□□□ -0
RTN3-214ENST00000545432 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
RTN3-214ENST00000545432 CLEC18BQ6UXF7 455 aa15.04■□□□□ -0
RTN3-214ENST00000545432 PTAR1Q7Z6K3 402 aaPredicted RBP15.04■□□□□ -0
RTN3-214ENST00000545432 C14orf80Q86SX3 495 aa15.04■□□□□ -0
RTN3-214ENST00000545432 ZNF683Q8IZ20 524 aa15.04■□□□□ -0
RTN3-214ENST00000545432 CLEC18CQ8NCF0 446 aa15.04■□□□□ -0
RTN3-214ENST00000545432 DENND6BQ8NEG7 585 aa15.04■□□□□ -0
RTN3-214ENST00000545432 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms