RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SPG21Q9NZD8 308 aa7.19□□□□□ -1.26
SPPL3-209ENST00000545209 SAMD15Q9P1V8 674 aa7.19□□□□□ -1.26
SPPL3-209ENST00000545209 AFF4Q9UHB7 1163 aaKnown RBP7.19□□□□□ -1.26
SPPL3-209ENST00000545209 NUDT5Q9UKK9 219 aa7.19□□□□□ -1.26
SPPL3-209ENST00000545209 MAFFQ9ULX9 164 aa7.19□□□□□ -1.26
SPPL3-209ENST00000545209 MAGED2Q9UNF1 606 aaPredicted RBP7.19□□□□□ -1.26
SPPL3-209ENST00000545209 HBS1LQ9Y450 684 aaKnown RBP7.19□□□□□ -1.26
SPPL3-209ENST00000545209 HS3ST4Q9Y661 456 aa7.19□□□□□ -1.26
SPPL3-209ENST00000545209 FNDC1Q4ZHG4 1894 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 WDR27A2RRH5 827 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 FAM47DPA6NHR8 397 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ARHGAP42A6NI28 874 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 WASH4PA8MWX3 477 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 F5H423 210 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 EBAG9O00559 213 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 TLR5O60602 858 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 AVILO75366 819 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 KRT37O76014 449 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ANXA9O76027 345 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 VNN2O95498 520 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 EFEMP2O95967 443 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 JCHAINP01591 159 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MT-ND3P03897 115 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CCNB1P14635 433 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 PGAM1P18669 254 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ELF1P32519 619 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 PGFP49763 221 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ARSDP51689 593 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 NDST2P52849 883 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SLC18A1P54219 525 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SNRPNP63162 240 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 IL9RQ01113 521 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 DSG1Q02413 1049 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 NAB1Q13506 487 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SEPT7Q16181 437 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 LRRC26Q2I0M4 334 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 TEX44Q53QW1 395 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 FAM117BQ6P1L5 589 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 RSPO2Q6UXX9 243 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MICALCLQ6ZW33 695 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 RAB44Q7Z6P3 723 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CPLX4Q7Z7G2 160 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 LINC00523Q86TU6 105 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SLC26A11Q86WA9 606 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 LRRC6Q86X45 466 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CHSY1Q86X52 802 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SPATS2Q86XZ4 545 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 IGDCC3Q8IVU1 814 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CTAGE3PQ8IX95 158 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 GPR65Q8IYL9 337 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 RNF168Q8IYW5 571 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF276Q8N554 614 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ANKRD42Q8N9B4 389 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 NETO2Q8NC67 525 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MGARPQ8TDB4 240 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 NSMCE1Q8WV22 266 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SLC44A1Q8WWI5 657 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MAML1Q92585 1016 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CDKL2Q92772 493 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ALKBH8Q96BT7 664 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF689Q96CS4 500 aaPredicted RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MRRFQ96E11 262 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CHMP6Q96FZ7 201 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SGSM3Q96HU1 749 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 TEKT5Q96M29 485 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 AGAP3Q96P47 875 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 YME1L1Q96TA2 773 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 MDFIQ99750 246 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CEP41Q9BYV8 373 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 FAM107BQ9H098 131 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 CCDC134Q9H6E4 229 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 LRRC40Q9H9A6 602 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 HAUS2Q9NVX0 235 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 BFARQ9NZS9 450 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 PPARGC1AQ9UBK2 798 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF180Q9UJW8 692 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 NEU3Q9UQ49 428 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 AAR2Q9Y312 384 aaKnown RBP7.18□□□□□ -1.26
SPPL3-209ENST00000545209 TTLL3Q9Y4R7 772 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 PCDHA11Q9Y5I1 949 aa7.18□□□□□ -1.26
SPPL3-209ENST00000545209 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ADARB2-AS1A8MUL3 147 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 F5H5T6 163 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PRRG1O14668 218 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MATN3O15232 486 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PRPF4O43172 522 aaKnown RBP eCLIP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ADAM12O43184 909 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 KRT38O76015 456 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SUN1O94901 812 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 IGLV3-27P01718 113 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 POLBP06746 335 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 HMBSP08397 361 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 VIMP08670 466 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZDHHC11BP0C7U3 371 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms