RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 STIM2Q9P246 746 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 PCSK1NQ9UHG2 260 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SLC12A6Q9UHW9 1150 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 PAXBP1Q9Y5B6 917 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SNX10Q9Y5X0 201 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 COL5A1P20908 1838 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 A0A0A6YYK5 440 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 MACROD2A1Z1Q3 448 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 ATP5BP06576 529 aaKnown RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 CCDC175P0C221 793 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 MIPP30301 263 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 ADRA1BP35368 520 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 SSR1P43307 286 aaKnown RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 GRIA4P48058 902 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 TTC31Q49AM3 519 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 FSCBQ5H9T9 825 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 MS4A13Q5J8X5 152 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 KCNT1Q5JUK3 1230 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PROSER1Q86XN7 944 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 NIPA2Q8N8Q9 360 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 ZNF557Q8N988 423 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 BTN2A3PQ96KV6 586 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PEBP4Q96S96 227 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 BTBD1Q9H0C5 482 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PABPC3Q9H361 631 aaKnown RBP12.79□□□□□ -0.36
ACTN1-206ENST00000544964 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PPP2R2CQ9Y2T4 447 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 PCDHGB2Q9Y5G2 931 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 SNX11Q9Y5W9 270 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 HS3ST4Q9Y661 456 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 ADAMTS20P59510 1910 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 DOCK9Q9BZ29 2069 aa12.79□□□□□ -0.36
ACTN1-206ENST00000544964 FLRT2O43155 660 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 PRPSAP2O60256 369 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 SIN3BO75182 1162 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 FSBPO95073 299 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 MOCS3O95396 460 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 DNTTP04053 509 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 TACR2P21452 398 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CD27P26842 260 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 ARHGAP25P42331 645 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 HADHBP55084 474 aaKnown RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 SCAPQ12770 1279 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CDH18Q13634 790 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 ACAP1Q15027 740 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CHSY1Q86X52 802 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 LGI2Q8N0V4 545 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 TXLNBQ8N3L3 684 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
ACTN1-206ENST00000544964 GOLPH3Q9H4A6 298 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 FZD10Q9ULW2 581 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 ANKRD6Q9Y2G4 727 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
ACTN1-206ENST00000544964 BTNL10A8MVZ5 291 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 LUC7L3O95232 432 aaKnown RBP12.77□□□□□ -0.37
ACTN1-206ENST00000544964 ASLP04424 464 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 ATXN1LP0C7T5 689 aaKnown RBP12.77□□□□□ -0.37
ACTN1-206ENST00000544964 IL1R2P27930 398 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 PCK1P35558 622 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 GJC1P36383 396 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 TAS2R40P59535 323 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 CA9Q16790 459 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 C9orf64Q5T6V5 341 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 KIAA0895LQ68EN5 471 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 TXNRD3NBQ6F5E7 133 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-206ENST00000544964 USP30Q70CQ3 517 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 NTAN1Q96AB6 310 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 HAPLN3Q96S86 360 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 DDX50Q9BQ39 737 aaKnown RBP12.77□□□□□ -0.37
ACTN1-206ENST00000544964 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.37
ACTN1-206ENST00000544964 TMEM51Q9NW97 253 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 SUN2Q9UH99 717 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
ACTN1-206ENST00000544964 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms