RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 KLHL29Q96CT2 875 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 C7orf26Q96N11 449 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 CDK5RAP1Q96SZ6 601 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 UBE2OQ9C0C9 1292 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 GEMIN8Q9NWZ8 242 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 ATP5HO75947 161 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 ZDHHC11BP0C7U3 371 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 CCL5P13501 91 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 ADRA1AP35348 466 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 ARFIP2P53365 341 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 MARC1Q5VT66 337 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 FSTL4Q6MZW2 842 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 C16orf46Q6P387 395 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 POTEHQ6S545 545 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 TBC1D1Q86TI0 1168 aaPredicted RBP17.33■□□□□ 0.37
PTPRO-209ENST00000543886 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.37
PTPRO-209ENST00000543886 SLC25A51Q9H1U9 297 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 MTRRQ9UBK8 725 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 ZFP69BQ9UJL9 534 aa17.33■□□□□ 0.37
PTPRO-209ENST00000543886 MTO1Q9Y2Z2 717 aaKnown RBP17.33■□□□□ 0.37
PTPRO-209ENST00000543886 MICAL3Q7RTP6 2002 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 ADAM12O43184 909 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 PLIN3O60664 434 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 UNC5CO95185 931 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 HTRA3P83110 453 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 ITKQ08881 620 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 FASTKD1Q53R41 847 aaKnown RBP17.33■□□□□ 0.36
PTPRO-209ENST00000543886 PPM1JQ5JR12 505 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 DENND5AQ6IQ26 1287 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 KIAA1841Q6NSI8 718 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 CYB5D1Q6P9G0 228 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 SLC39A5Q6ZMH5 540 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 PTCD2Q8WV60 388 aaKnown RBP17.33■□□□□ 0.36
PTPRO-209ENST00000543886 ISL2Q96A47 359 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 AZIN2Q96A70 460 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 PABPC5Q96DU9 382 aaKnown RBP17.33■□□□□ 0.36
PTPRO-209ENST00000543886 MRGPRX2Q96LB1 330 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 TTLL2Q9BWV7 592 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 NACA2Q9H009 215 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 NT5MQ9NPB1 228 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 KLC4Q9NSK0 619 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 EMCNQ9ULC0 261 aa17.33■□□□□ 0.36
PTPRO-209ENST00000543886 DRGXA6NNA5 263 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 J3KR12 359 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 RAMP2O60895 175 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 PEX11BO96011 259 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 MPOP05164 745 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 RPL17P18621 184 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 OR1D2P34982 312 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 MAGEA12P43365 314 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 TUFMP49411 452 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 STX3Q13277 289 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 POLD3Q15054 466 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 PCSK7Q16549 785 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 CMC1Q7Z7K0 106 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 CEP295NLQ96MC4 621 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 ZNF778Q96MU6 729 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 HBS1LQ9Y450 684 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 TCAF1Q9Y4C2 921 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 GOLGA8TH3BQL2 631 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 F7P08709 466 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 WNT3AP56704 352 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 IKBKEQ14164 716 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 PARP15Q460N3 678 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 TRIM60Q495X7 471 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 KDELC2Q7Z4H8 507 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 MTDHQ86UE4 582 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 CRLF3Q8IUI8 442 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 VPS39Q96JC1 886 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 ZNF512Q96ME7 567 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 MRM3Q9HC36 420 aaKnown RBP17.32■□□□□ 0.36
PTPRO-209ENST00000543886 BACE2Q9Y5Z0 518 aa17.32■□□□□ 0.36
PTPRO-209ENST00000543886 F5H5T6 163 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 NQO1P15559 274 aaKnown RBP17.31■□□□□ 0.36
PTPRO-209ENST00000543886 PAMP19021 973 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 TACR2P21452 398 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 OR1E1P30953 314 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 ATP5C1P36542 298 aaKnown RBP17.31■□□□□ 0.36
PTPRO-209ENST00000543886 HADHAP40939 763 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 OCRLQ01968 901 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 SLC10A7Q0GE19 358 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 SEPT6Q14141 434 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 TAF1BQ53T94 588 aaPredicted RBP17.31■□□□□ 0.36
PTPRO-209ENST00000543886 RANBP10Q6VN20 620 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 PDZD8Q8NEN9 1154 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 IMP4Q96G21 291 aaKnown RBP17.31■□□□□ 0.36
PTPRO-209ENST00000543886 IGSF21Q96ID5 467 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 KLHL5Q96PQ7 755 aa17.31■□□□□ 0.36
PTPRO-209ENST00000543886 MYCBPQ99417 103 aaPredicted RBP17.31■□□□□ 0.36
PTPRO-209ENST00000543886 HEY2Q9UBP5 337 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms