RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 CACNG3O60359 315 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 ANXA9O76027 345 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 PDE5AO76074 875 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 F7P08709 466 aaPredicted RBP13.7□□□□□ -0.22
PPME1-208ENST00000543525 CSRP3P50461 194 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 RPL14P50914 215 aaKnown RBP13.7□□□□□ -0.22
PPME1-208ENST00000543525 XIAPP98170 497 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 OR52E8Q6IFG1 317 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 PKN3Q6P5Z2 889 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 METTL23Q86XA0 190 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 PYDC1Q8WXC3 89 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 TMEM30AQ9NV96 361 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
PPME1-208ENST00000543525 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
PPME1-208ENST00000543525 TRPV2Q9Y5S1 764 aa13.7□□□□□ -0.22
PPME1-208ENST00000543525 DFFAO00273 331 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 MATN2O00339 956 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 SLC22A2O15244 555 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 HDAC3O15379 428 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 DDHD2O94830 711 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 ODC1P11926 461 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 MPSTP25325 297 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 HOXC8P31273 242 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 HTR7P34969 479 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 GRIA4P48058 902 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 IRX1P78414 480 aaPredicted RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 CDC16Q13042 620 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 C16orf89Q6UX73 402 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 ACAD11Q709F0 780 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 OTOP3Q7RTS5 596 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 SETD3Q86TU7 594 aaPredicted RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 ACVR1CQ8NER5 493 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
PPME1-208ENST00000543525 MAPK15Q8TD08 544 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 USP33Q8TEY7 942 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 DPF3Q92784 378 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 FCRL5Q96RD9 977 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 SERPINI1Q99574 410 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 POMPQ9Y244 141 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 GIT1Q9Y2X7 761 aa13.69□□□□□ -0.22
PPME1-208ENST00000543525 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 SAT1P21673 171 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PIK3R1P27986 724 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CCNHP51946 323 aaPredicted RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 GEMP55040 296 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 FKBP1BP68106 108 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 SPRYD7Q5W111 196 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 BEND5Q7L4P6 421 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 SAPCD2Q86UD0 394 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CCDC117Q8IWD4 279 aaPredicted RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 SHKBP1Q8TBC3 707 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 OR52B2Q96RD2 323 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CCDC28BQ9BUN5 200 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 GLOD4Q9HC38 313 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 ZDHHC7Q9NXF8 308 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PRPF19Q9UMS4 504 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 SSX2IPQ9Y2D8 614 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 ACOT9Q9Y305 439 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 ASB3Q9Y575 518 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 RGSL1A5PLK6 1076 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 SMIM24O75264 130 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PIGNO95427 931 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 ADSLP30566 484 aaPredicted RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 MTTPP55157 894 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 LRRC8EQ6NSJ5 796 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 TMC7Q7Z402 723 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 PDSS2Q86YH6 399 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
PPME1-208ENST00000543525 CPSF7Q8N684 471 aaKnown RBP13.68□□□□□ -0.22
PPME1-208ENST00000543525 RP9Q8TA86 221 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms