RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 RSPH1Q8WYR4 309 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 EDEM1Q92611 657 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 CIB1Q99828 191 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 KLHL3Q9UH77 587 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 YDJCA8MPS7 323 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 SEC24AO95486 1093 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 MTX3Q5HYI7 312 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 C10orf120Q5SQS8 335 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ARMC3Q5W041 872 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 JOSD2Q8TAC2 188 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 FOPNLQ96NB1 174 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ZNF670Q9BS34 389 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 PDGFCQ9NRA1 345 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 EURLQ9NYK6 297 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 F8W810 466 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.73
SUDS3-204ENST00000543473 MAPK1P28482 360 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 SLC7A2P52569 658 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 LSM3P62310 102 aaKnown RBP19.61■□□□□ 0.73
SUDS3-204ENST00000543473 DPYSQ14117 519 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 EML3Q32P44 896 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 MARC1Q5VT66 337 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 ANKRD22Q5VYY1 191 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 FAM183BPQ6ZVS7 135 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 ANKS1BQ7Z6G8 1248 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 NOL11Q9H8H0 719 aaKnown RBP19.61■□□□□ 0.73
SUDS3-204ENST00000543473 TRAFD1O14545 582 aaPredicted RBP19.61■□□□□ 0.73
SUDS3-204ENST00000543473 PPP1R11O60927 126 aaPredicted RBP19.61■□□□□ 0.73
SUDS3-204ENST00000543473 CABYRO75952 493 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 CRTAMO95727 393 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 KRT20P35900 424 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 DGKZQ13574 1117 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 TP53BP2Q13625 1128 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 OLFML1Q6UWY5 402 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 DSELQ8IZU8 1212 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 TBL1YQ9BQ87 522 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 XPR1Q9UBH6 696 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 PHLPP1O60346 1717 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 NAA20P61599 178 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 BANPQ8N9N5 519 aa19.61■□□□□ 0.73
SUDS3-204ENST00000543473 H3BNX3 289 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TKTP29401 623 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 NUMBP49757 651 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ACTR3P61158 418 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TOP3AQ13472 1001 aaPredicted RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 VSIG10LQ86VR7 867 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 FBXO30Q8TB52 745 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DEPDC7Q96QD5 511 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ABCB10Q9NRK6 738 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TMA7Q9Y2S6 64 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 SQORQ9Y6N5 450 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 A0A1B0GW55 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ATP6AP2A0A1C7CYW4 349 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ATP6AP2O75787 350 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 CPSF4O95639 269 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L2P0CJ85 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L3P0CJ86 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L4P0CJ87 422 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L5P0CJ88 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L6P0CJ89 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4L7P0CJ90 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ITGB5P18084 799 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 CCNFP41002 786 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 NOMO1Q15155 1222 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DCAF12L1Q5VU92 463 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DCP1BQ8IZD4 617 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 C19orf18Q8NEA5 215 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 PRDM12Q9H4Q4 367 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ALG9Q9H6U8 611 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 SETD4Q9NVD3 440 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 DUX4Q9UBX2 424 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 CCDC166P0CW27 439 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 CDKN2BP42772 138 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 RALGPS1Q5JS13 557 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 METTL21CQ5VZV1 264 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 FAM117BQ6P1L5 589 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 SLC2A14Q8TDB8 520 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TBCDQ9BTW9 1192 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 HPS4Q9NQG7 708 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TMCC3Q9ULS5 477 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 LTA4HP09960 611 aaKnown RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 MOB2Q70IA6 237 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 FAM228AQ86W67 206 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 MIB1Q86YT6 1006 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ADHFE1Q8IWW8 467 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 POC5Q8NA72 575 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 OR56A4Q8NGH8 313 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 RDH11Q8TC12 318 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 TRAPPC12Q8WVT3 735 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ZNF512Q96ME7 567 aaPredicted RBP19.6■□□□□ 0.73
SUDS3-204ENST00000543473 WDR70Q9NW82 654 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 BTBD3Q9Y2F9 522 aa19.6■□□□□ 0.73
SUDS3-204ENST00000543473 ADAMTS3O15072 1205 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 RAD51BO15315 384 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 KATNA1O75449 491 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 TIPRLO75663 272 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 HNRNPLP14866 589 aaKnown RBP eCLIP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 BNIP2Q12982 314 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms