RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ARL2P36404 184 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GUCA1AP43080 201 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 DMC1Q14565 340 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 TCEA2Q15560 299 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 PKN2Q16513 984 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CRY1Q16526 586 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 RFX8Q6ZV50 586 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF655Q8N720 491 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ZSWIM2Q8NEG5 633 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 MYCBPAPQ8TBZ2 947 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 HPS4Q9NQG7 708 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC24A2Q9UI40 661 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 PADI4Q9UM07 663 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 C1orf232A0A0U1RR37 186 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 LRRC10BA6NIK2 292 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CACNB4O00305 520 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 QSOX1O00391 747 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 DNALI1O14645 258 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 AKAP10O43572 662 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CLDN11O75508 207 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP1A1P04798 512 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CPA3P15088 417 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 HSPA14Q0VDF9 509 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GPM6BQ13491 265 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 BMPR2Q13873 1038 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 PAPD7Q5XG87 772 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 HORMAD1Q86X24 394 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 KREMEN2Q8NCW0 462 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 EXOC2Q96KP1 924 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 NMRAL1Q9HBL8 299 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ZCCHC17Q9NP64 241 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CATSPERZQ9NTU4 200 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 NOP53Q9NZM5 478 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 SNX6Q9UNH7 406 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 Q9Y3F1 56 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 A0A0A0MRY4 1105 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 MYBL2P10244 700 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 DNAJC3Q13217 504 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 IL17AQ16552 155 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 VARS2Q5ST30 1063 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 LRRC38Q5VT99 294 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 NEPROQ6NW34 567 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ST13P4Q8IZP2 240 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CLEC4FQ8N1N0 589 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ICA1LQ8NDH6 482 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 REPS1Q96D71 796 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 BTN2A3PQ96KV6 586 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 SPATA13Q96N96 652 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ACAT2Q9BWD1 397 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CREBZFQ9NS37 354 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ARL15Q9NXU5 204 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 AGO1Q9UL18 857 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 DNAJC16Q9Y2G8 782 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GPSM3Q9Y4H4 160 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 KNDC1Q76NI1 1749 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CLUHO75153 1309 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ABHD14A-ACY1A0A1B0GW23 586 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 AGRPO00253 132 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 BTN3A1O00481 513 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GRM6O15303 877 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 DGKIO75912 1065 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ERCC2P18074 760 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CRABP2P29373 138 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 NOMO3P69849 1222 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ARSHQ5FYA8 562 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 OLFML2BQ68BL8 750 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 SEL1L3Q68CR1 1132 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 PSTKQ8IV42 348 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 BBS7Q8IWZ6 715 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ELMO1Q92556 727 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 IL22Q9GZX6 179 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 PRDM12Q9H4Q4 367 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 GMIPQ9P107 970 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNHIT2Q9UHR6 403 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 TAGLN3Q9UI15 199 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 SIK3Q9Y2K2 1263 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 STARD13Q9Y3M8 1113 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM237AA0A1B0GTK4 181 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ERBB2P04626 1255 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TCN1P20061 433 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 DGKAP23743 735 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 FMO4P31512 558 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PIK3CGP48736 1102 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CDK16Q00536 496 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 MBTD1Q05BQ5 628 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ECM1Q16610 540 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP51A1Q16850 503 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 KCTD21Q4G0X4 260 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GPR139Q6DWJ6 353 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PHF13Q86YI8 300 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TNS4Q8IZW8 715 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ING5Q8WYH8 240 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ZBTB10Q96DT7 871 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms