RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 GJA1P17302 382 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PSMA3P25788 255 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CNTFP26441 200 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 DEKP35659 375 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PPP3CCP48454 512 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TUBP50607 506 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF75DP51815 510 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TKTL1P51854 596 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 EPHA5P54756 1037 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SCAND1P57086 179 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TAF10Q12962 218 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TEAD2Q15562 447 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ASIC2Q16515 512 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 MEA1Q16626 185 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLC5A9Q2M3M2 681 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PRSS36Q5K4E3 855 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TAF3Q5VWG9 929 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 UBE2R2Q712K3 238 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TMC6Q7Z403 805 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF677Q86XU0 584 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TMC8Q8IU68 726 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SIX6OS1Q8N1H7 587 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ESX1Q8N693 406 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF513Q8N8E2 541 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TDRD5Q8NAT2 981 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PDZD8Q8NEN9 1154 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SCAMP5Q8TAC9 235 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ITFG1Q8TB96 612 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ASB12Q8WXK4 309 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 MRPS31Q92665 395 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TCEAL4Q96EI5 215 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 RPGRIP1Q96KN7 1286 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 MYRFLQ96LU7 910 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 NOX5Q96PH1 765 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 YIPF2Q9BWQ6 316 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 LHX5Q9H2C1 402 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 BRD9Q9H8M2 597 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FAM204AQ9H8W3 233 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TRPM5Q9NZQ8 1165 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 GMIPQ9P107 970 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 REV1Q9UBZ9 1251 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CAPN11Q9UMQ6 739 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 INVSQ9Y283 1065 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 MTCL1Q9Y4B5 1905 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SCO2A0A1W2PP80 73 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 B4E171 279 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TULP2O00295 520 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 AP5Z1O43299 807 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 DLX3O60479 287 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TP53P04637 393 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 HNRNPCP07910 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MMEP08473 750 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NAT2P11245 290 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CEBPBP17676 345 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 DDX6P26196 483 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PEX2P28328 305 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CASP14P31944 242 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CCR2P41597 374 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GPD2P43304 727 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ACADSBP45954 432 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 RGS7P49802 495 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 KIF11P52732 1056 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CYP4F8P98187 520 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CDR2Q01850 454 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 KLHL30Q0D2K2 578 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ADIGQ0VDE8 80 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TAF5Q15542 800 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SLC14A2Q15849 920 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CCNG2Q16589 344 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 RAB41Q5JT25 222 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PMF1Q6P1K2 205 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GAREM2Q75VX8 874 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GPRIN1Q7Z2K8 1008 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 C11orf74Q86VG3 221 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ADHFE1Q8IWW8 467 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ARMC10Q8N2F6 343 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TMEM35BQ8NCS4 154 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MSANTD4Q8NCY6 345 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SHKBP1Q8TBC3 707 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SLC20A1Q8WUM9 679 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SLC35F5Q8WV83 523 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 KCTD13Q8WZ19 329 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 OVCA2Q8WZ82 227 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 FGF13Q92913 245 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TP53INP1Q96A56 240 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MCRS1Q96EZ8 462 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 HSFY1Q96LI6 401 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ORAI3Q9BRQ5 295 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SSBP4Q9BWG4 385 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TTYH3Q9C0H2 523 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 KCNF1Q9H3M0 494 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SYNCQ9H7C4 482 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TRPC7Q9HCX4 862 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 DMRT3Q9NQL9 472 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TLR8Q9NR97 1041 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms