RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 ENDOD1O94919 500 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 PCDH8O95206 1070 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 DGKAP23743 735 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
GPN3-203ENST00000543199 CLDN2P57739 230 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 SNX16P57768 344 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 KCNMA1Q12791 1236 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
GPN3-203ENST00000543199 CAMK4Q16566 473 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 SEL1L3Q68CR1 1132 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
GPN3-203ENST00000543199 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 BAP1Q92560 729 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
GPN3-203ENST00000543199 NPY6RQ99463 290 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.09□□□□□ -0.31
GPN3-203ENST00000543199 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
GPN3-203ENST00000543199 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
GPN3-203ENST00000543199 PRNPP04156 253 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 HNRNPA2B1P22626 353 aaKnown RBP13.08□□□□□ -0.32
GPN3-203ENST00000543199 AKT2P31751 481 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
GPN3-203ENST00000543199 CXCR3P49682 368 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 ZNF683Q8IZ20 524 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 SLC22A18ASQ8N1D0 253 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 DCBLD1Q8N8Z6 715 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 DCAF4L2Q8NA75 395 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 TMIEQ8NEW7 156 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 OR7D4Q8NG98 312 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 OR4C6Q8NH72 309 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
GPN3-203ENST00000543199 TBCBQ99426 244 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 PRORYQ9H606 182 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 KLHL11Q9NVR0 708 aa13.08□□□□□ -0.32
GPN3-203ENST00000543199 ZFR2Q9UPR6 939 aaKnown RBP13.08□□□□□ -0.32
GPN3-203ENST00000543199 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 SRGAP2O75044 1071 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 LEFTY1O75610 366 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 PIAS2O75928 621 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 MT-CO3P00414 261 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 MYF5P13349 255 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 OR1E1P30953 314 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 C2CD6Q53TS8 623 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 ZNF542PQ5EBM4 170 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 FAM102AQ5T9C2 384 aaPredicted RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 NEK5Q6P3R8 708 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 GCNT7Q6ZNI0 430 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 SETD3Q86TU7 594 aaPredicted RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 IRF2BP1Q8IU81 584 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 ZDHHC17Q8IUH5 632 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
GPN3-203ENST00000543199 FGF11Q92914 225 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 PPP1R16AQ96I34 528 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 RRN3Q9NYV6 651 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 IL36AQ9UHA7 158 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 PCDHB1Q9Y5F3 818 aa13.07□□□□□ -0.32
GPN3-203ENST00000543199 ACTN2P35609 894 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 E2F1Q01094 437 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 RAPGEF1Q13905 1077 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 NT5C3BQ969T7 300 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 DNAJC28Q9NX36 388 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
GPN3-203ENST00000543199 SHROOM3Q8TF72 1996 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 DRGXA6NNA5 263 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
GPN3-203ENST00000543199 NEBLO76041 1014 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 GIMD1P0DJR0 217 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 CKMT1AP12532 417 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 FLT3P36888 993 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 DNA2P51530 1060 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 TPD52L1Q16890 204 aaPredicted RBP13.06□□□□□ -0.32
GPN3-203ENST00000543199 TBC1D25Q3MII6 688 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 TAF3Q5VWG9 929 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 Q6ZSR6 202 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 FAM71AQ8IYT1 594 aa13.06□□□□□ -0.32
GPN3-203ENST00000543199 CACTIN-AS1Q8N1I8 211 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms