RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 MAFAQ8NHW3 353 aaPredicted RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 TTC8Q8TAM2 541 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 CSGALNACT1Q8TDX6 532 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 WFIKKN2Q8TEU8 576 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 CINPQ9BW66 212 aaPredicted RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GBA3Q9H227 469 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ETNK1Q9HBU6 452 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GLOD4Q9HC38 313 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 NT5MQ9NPB1 228 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GTSE1Q9NYZ3 720 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GRHL1Q9NZI5 618 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 IGSF9Q9P2J2 1179 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 DEC1Q9P2X7 70 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 INTS6Q9UL03 887 aaKnown RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 TPX2Q9ULW0 747 aaKnown RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 MYO18AQ92614 2054 aaKnown RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 E7EVH7 732 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 F5H423 210 aaPredicted RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 ARNTLO00327 626 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 TRIM24O15164 1050 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 HLA-DQB2P05538 268 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 CISD3P0C7P0 127 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 POLR2EP19388 210 aaKnown RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 NFKB1P19838 968 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 PSMB4P28070 264 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 CD68P34810 354 aaPredicted RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 GJA4P35212 333 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 LMAN1P49257 510 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 PLTPP55058 493 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 CAV1Q03135 178 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SULT2A1Q06520 285 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SLC20A2Q08357 652 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 ITKQ08881 620 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 PRPSAP1Q14558 356 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 INO80DQ53TQ3 878 aaPredicted RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 RNASEH2BQ5TBB1 312 aaKnown RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 MBLAC2Q68D91 279 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 KIAA0907Q7Z7F0 614 aaPredicted RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 CPT1BQ92523 772 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 ART4Q93070 314 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 EXOC4Q96A65 974 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 ZNF419Q96HQ0 510 aaPredicted RBP10.86□□□□□ -0.67
DDB1-221ENST00000543162 PPP1R2P1Q96PQ5 205 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 KCNK12Q9HB15 430 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SLC25A13Q9UJS0 675 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 NFU1Q9UMS0 254 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SLC27A6Q9Y2P4 619 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 ACTL7AQ9Y615 435 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
DDB1-221ENST00000543162 CXorf51AA0A1B0GTR3 108 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GOLGA6BA6NDN3 693 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 SMAPO00193 183 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 ERLIN1O75477 346 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 ANXA9O76027 345 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 TMCC1O94876 653 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 APRTP07741 180 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 HSPA9P38646 679 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 SLC6A11P48066 632 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 SERPINH1P50454 418 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 MAXP61244 160 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 ECT2LQ008S8 904 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 TFF2Q03403 129 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 KDSRQ06136 332 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 SEMA5AQ13591 1074 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 BRD3Q15059 726 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 CYTH1Q15438 398 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GEN1Q17RS7 908 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 PREPLQ4J6C6 727 aaPredicted RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 HIBCHQ6NVY1 386 aaPredicted RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 ZDHHC24Q6UX98 284 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 METTL3Q86U44 580 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 ADIPOR2Q86V24 386 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 HOOK3Q86VS8 718 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GSPT2Q8IYD1 628 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 PGBD5Q8N414 524 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 SLC44A3Q8N4M1 653 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.85□□□□□ -0.67
DDB1-221ENST00000543162 ATP11CQ8NB49 1132 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 FBXO25Q8TCJ0 367 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.67
DDB1-221ENST00000543162 TTC17Q96AE7 1141 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 PSKH2Q96QS6 385 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 FCRL5Q96RD9 977 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 CIPCQ9C0C6 399 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 POLR1EQ9GZS1 481 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 ZDHHC18Q9NUE0 388 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
DDB1-221ENST00000543162 MTRF1LQ9UGC7 380 aaKnown RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
DDB1-221ENST00000543162 ERI2A8K979 691 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms