RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ENDOD1O94919 500 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 CAPNS1P04632 268 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
RTN3-212ENST00000543123 CTSLP07711 333 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 DESP17661 470 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 HNRNPA2B1P22626 353 aaKnown RBP13.4□□□□□ -0.26
RTN3-212ENST00000543123 PTPN9P43378 593 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 NEK3P51956 506 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 JAM2P57087 298 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 NRG1Q02297 640 aaPredicted RBP13.4□□□□□ -0.26
RTN3-212ENST00000543123 GNA12Q03113 381 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 SHBQ15464 509 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 CDO1Q16878 200 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 DHRS13Q6UX07 377 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.26
RTN3-212ENST00000543123 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 HORMAD1Q86X24 394 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 EID2Q8N6I1 236 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
RTN3-212ENST00000543123 NEK11Q8NG66 645 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 OR7D4Q8NG98 312 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 GRIN3AQ8TCU5 1115 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 SLC20A1Q8WUM9 679 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 LMBRD1Q9NUN5 540 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 LHX6Q9UPM6 363 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 NBEAQ8NFP9 2946 aa13.4□□□□□ -0.27
RTN3-212ENST00000543123 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
RTN3-212ENST00000543123 PCDH8O95206 1070 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 CALB1P05937 261 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 RHOQP17081 205 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ITGB7P26010 798 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ADRA1BP35368 520 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 DNA2P51530 1060 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 TAS2R38P59533 333 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 FMO1Q01740 532 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 MYL5Q02045 173 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 POLD3Q15054 466 aaPredicted RBP13.39□□□□□ -0.27
RTN3-212ENST00000543123 STX1AQ16623 288 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
RTN3-212ENST00000543123 FBXL19Q6PCT2 694 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 DPY19L3Q6ZPD9 716 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 SPATS2Q86XZ4 545 aaKnown RBP13.39□□□□□ -0.27
RTN3-212ENST00000543123 EMC1Q8N766 993 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 TMEM145Q8NBT3 493 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ISG20Q96AZ6 181 aaKnown RBP13.39□□□□□ -0.27
RTN3-212ENST00000543123 NXPE2Q96DL1 559 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 LRIG1Q96JA1 1093 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 HEPHQ9BQS7 1158 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 OSBPL2Q9H1P3 480 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 NLRC4Q9NPP4 1024 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 TMPRSS4Q9NRS4 437 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 ACACAQ13085 2346 aa13.39□□□□□ -0.27
RTN3-212ENST00000543123 DOCK4Q8N1I0 1966 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 FAM170AA1A519 330 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ZSCAN5CA6NGD5 496 aaPredicted RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 C2CD4BA6NLJ0 364 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 SLC31A1O15431 190 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 RAMP2O60895 175 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 LEFTY1O75610 366 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ZMPSTE24O75844 475 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 THEGLP0DJG4 465 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ALPPL2P10696 532 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 KRT3P12035 628 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 PRLRP16471 622 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 GLDCP23378 1020 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ACADVLP49748 655 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 CCNHP51946 323 aaPredicted RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 GSCP56915 257 aaPredicted RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 ZNF284Q2VY69 593 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 CARD16Q5EG05 197 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 DCP2Q8IU60 420 aaKnown RBP13.38□□□□□ -0.27
RTN3-212ENST00000543123 PLPP6Q8IY26 295 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 CHST14Q8NCH0 376 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 MAGEH1Q9H213 219 aa13.38□□□□□ -0.27
RTN3-212ENST00000543123 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms