RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZNF821O75541 412 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 TMCC1O94876 653 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 PYGMP11217 842 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 PTPN7P35236 360 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 CETN2P41208 172 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 PTPN5P54829 565 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 SLC10A2Q12908 348 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 ELAVL3Q14576 367 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 MEI1Q5TIA1 1274 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 KAZNQ674X7 775 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 STK40Q8N2I9 435 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 ATPAF2Q8N5M1 289 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 ZBTB44Q8NCP5 570 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 OR2A12Q8NGT7 310 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 CCDC114Q96M63 670 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 ZNF599Q96NL3 588 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 FAM129BQ96TA1 746 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 SLC6A17Q9H1V8 727 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 RSPH9Q9H1X1 276 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 DTLQ9NZJ0 730 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 EFR3BQ9Y2G0 817 aa17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-203ENST00000543002 MCF2LO15068 1137 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 ALOX15BO15296 676 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 CST8O60676 142 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 MX2P20592 715 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 GARSP41250 739 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 DYNLT1P63172 113 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 RFTN1Q14699 578 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 LLGL1Q15334 1064 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 OR8D1Q8WZ84 308 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 PRCCQ92733 491 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 SIPA1Q96FS4 1042 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 TSGA13Q96PP4 275 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 OSBPL8Q9BZF1 889 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 TPSD1Q9BZJ3 242 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 TNKS2Q9H2K2 1166 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 PCDHGA2Q9Y5H1 932 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 HEY1Q9Y5J3 304 aa17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
RABGGTA-203ENST00000543002 CACNA1HO95180 2353 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 BNIP3LO60238 219 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 RNASEH1O60930 286 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 MAP3K6O95382 1288 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 TGM2P21980 687 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 RECQLP46063 649 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 NR2C2P49116 596 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 DNA2P51530 1060 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 RPS14P62263 151 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 ZBTB16Q05516 673 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 ADCY2Q08462 1091 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 RPS6KA1Q15418 735 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 CYTH1Q15438 398 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 CARD16Q5EG05 197 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 TMCO4Q5TGY1 634 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 ZNF776Q68DI1 518 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 KIAA1324Q6UXG2 1013 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 NPNTQ6UXI9 565 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 BBS12Q6ZW61 710 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 DSG4Q86SJ6 1040 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 HDAC11Q96DB2 347 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 HEMGNQ9BXL5 484 aa17.41■□□□□ 0.38
RABGGTA-203ENST00000543002 GOLGA6L9A6NEM1 432 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 LILRB5O75023 590 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 PEX11BO96011 259 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 GSRP00390 522 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 CCNCP24863 283 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 CNR2P34972 360 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 RHOAP61586 193 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 SNRPD1P62314 119 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 ZNF211Q13398 564 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 USP39Q53GS9 565 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 DCAF12L1Q5VU92 463 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 TIGD7Q6NT04 549 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 AADACL2Q6P093 401 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 DPY19L3Q6ZPD9 716 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 BZW1Q7L1Q6 419 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 MMAAQ8IVH4 418 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 OR2AP1Q8NGE2 309 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 FATE1Q969F0 183 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 OLFM3Q96PB7 478 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 HERPUD2Q9BSE4 406 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 TM6SF2Q9BZW4 377 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 LHX3Q9UBR4 397 aa17.4■□□□□ 0.38
RABGGTA-203ENST00000543002 MUC6Q6W4X9 2439 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 ZNF217O75362 1048 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 DNTTP04053 509 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 CHRNA3P32297 505 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 P2RY2P41231 377 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 CCNHP51946 323 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 SLC10A7Q0GE19 358 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 BYSLQ13895 437 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 LBRQ14739 615 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 PDK1Q15118 436 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 CST6Q15828 149 aa17.39■□□□□ 0.37
RABGGTA-203ENST00000543002 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms