RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 HDAC3O15379 428 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 ADSSP30520 456 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 GSSP48637 474 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 BNIP2Q12982 314 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 BOP1Q14137 746 aaKnown RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 RGS21Q2M5E4 152 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 PIWIL4Q7Z3Z4 852 aaKnown RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 HSFY1Q96LI6 401 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 ULBP1Q9BZM6 244 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CORO1CQ9ULV4 474 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 hCG_1818297A0A087WSY0 165 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ALOX15BO15296 676 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ZBTB14O43829 449 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 IGSF6O95976 241 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 CCNA2P20248 432 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 GLRA2P23416 452 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 NOS3P29474 1203 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 GRIA4P48058 902 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ITGADQ13349 1161 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SLC9A5Q14940 896 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 WDR60Q8WVS4 1066 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 EBNA1BP2Q99848 306 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 TBCDQ9BTW9 1192 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 POLE3Q9NRF9 147 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 PLA2G4CQ9UP65 541 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 USP20Q9Y2K6 914 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 TMEM191CA6NGB0 347 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SNPHO15079 494 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SPTLC1O15269 473 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 POMCP01189 267 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 GABRB2P47870 512 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 KLHL17Q6TDP4 642 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 MKL1Q969V6 931 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 OMA1Q96E52 524 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 COQ7Q99807 217 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ZNF670Q9BS34 389 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 CHKBQ9Y259 395 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 MFSD4BQ5TF39 518 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 LGI2Q8N0V4 545 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SFRP1Q8N474 314 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 POP5Q969H6 163 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 CIPCQ9C0C6 399 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 PRPF19Q9UMS4 504 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 BCLAF3A2AJT9 711 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 OPLAHO14841 1288 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 USP17L7P0C7H9 530 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 TYMPP19971 482 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 CDC25CP30307 473 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 MAPK10P53779 464 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ROR2Q01974 943 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 STX4Q12846 297 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 IRF2BP2Q7Z5L9 587 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 SLC41A1Q8IVJ1 513 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 FBXO30Q8TB52 745 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 ANKRD49Q8WVL7 239 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 NACC2Q96BF6 587 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 PLGRKTQ9HBL7 147 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
TNC-212ENST00000542877 VPS51Q9UID3 782 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
TNC-212ENST00000542877 DIP2CQ9Y2E4 1556 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 TNS2Q63HR2 1409 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 PRR23AA6NEV1 266 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 STX11O75558 287 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 MLYCDO95822 493 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 IL6P05231 212 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 COX7A2P14406 83 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 FLT3P36888 993 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 MARCKSL1P49006 195 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.28
TNC-212ENST00000542877 TRABD2AQ86V40 505 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 SNRNP25Q9BV90 132 aaKnown RBP13.27□□□□□ -0.28
TNC-212ENST00000542877 OSBPL11Q9BXB4 747 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 ADARB2Q9NS39 739 aaKnown RBP13.27□□□□□ -0.28
TNC-212ENST00000542877 PNPLA3Q9NST1 481 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 UBAP1Q9NZ09 502 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 MCM8Q9UJA3 840 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 RPS6KA6Q9UK32 745 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.28
TNC-212ENST00000542877 BCL2L1Q07817 233 aa13.27□□□□□ -0.28
TNC-212ENST00000542877 CRY1Q16526 586 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms