RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FAM83EQ2M2I3 478 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 PABPC1LQ4VXU2 614 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 FBXL22Q6P050 247 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 GET4Q7L5D6 327 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 NKD2Q969F2 451 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 FAM129AQ9BZQ8 928 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 TXLNGQ9NUQ3 528 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ZNF358Q9NW07 568 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 FZD10Q9ULW2 581 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ATP6AP2A0A1C7CYW4 349 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 PSMD3O43242 534 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 RFPL2O75678 378 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ATP6AP2O75787 350 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 MTA2O94776 668 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 TACR2P21452 398 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 CDH13P55290 713 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 HSPA14Q0VDF9 509 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 RNASEH2BQ5TBB1 312 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 C1orf146Q5VVC0 180 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 LZTR1Q8N653 840 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 KREMEN2Q8NCW0 462 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 SMG7Q92540 1137 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 MARK4Q96L34 752 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 RAB3IPQ96QF0 476 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 FRMD8P1Q9BZ68 369 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 PIF1Q9H611 641 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 SEPT3Q9UH03 358 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 TRMT6Q9UJA5 497 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 SLC25A13Q9UJS0 675 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 TRHDEQ9UKU6 1024 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 RBM47A0AV96 593 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 LYPLA1O75608 230 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ZNF132P52740 706 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 DEFB103AP81534 67 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 SYTL3Q4VX76 610 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
TOP3A-208ENST00000542570 DENND6AQ8IWF6 608 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 CALML6Q8TD86 181 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 STK32AQ8WU08 396 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 KCTD4Q8WVF5 259 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 BADQ92934 168 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 BTN2A3PQ96KV6 586 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 TBATAQ96M53 351 aa10.3□□□□□ -0.76
TOP3A-208ENST00000542570 LAMB2P55268 1798 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 TRAV19A0A0A6YYK7 116 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 A0A0U1RQS6 177 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ADAMTS4O75173 837 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ZWINTO95229 277 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CBX6O95503 412 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 PGAM1P18669 254 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 GKP32189 559 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CD151P48509 253 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SNCBQ16143 134 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 QPCTQ16769 361 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ARMC12Q5T9G4 340 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ESAMQ96AP7 390 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CLPBQ9H078 707 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ALG9Q9H6U8 611 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 GLOD4Q9HC38 313 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC24A2Q9UI40 661 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 PNMA8BQ9ULN7 279 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ANKRD31Q8N7Z5 1873 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 C1orf232A0A0U1RR37 186 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CCT8L1PA6NM43 557 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CHADO15335 359 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 IRAK2O43187 625 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 IL1BP01584 269 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 UGT2B4P06133 528 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 PTPN3P26045 913 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 AARSP49588 968 aaKnown RBP eCLIP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 PFKPQ01813 784 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC1A5Q15758 541 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ALFQ53S48 1182 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 C11orf96Q7Z7L8 435 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SPATS2Q86XZ4 545 aaKnown RBP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 PQLC3Q8N755 202 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC35B2Q8TB61 432 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC26A7Q8TE54 656 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 NAT9Q9BTE0 207 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 FAM237BA0A1B0GVD1 139 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 MTMR11A4FU01 709 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 ZMPSTE24O75844 475 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 HIST1H2AGP0C0S8 130 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 CCDC166P0CW27 439 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 HIST1H2ADP20671 130 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 NMBRP28336 390 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC8A1P32418 973 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 MPP1Q00013 466 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 SLC10A2Q12908 348 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-208ENST00000542570 GRAMD1BQ3KR37 738 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 GALNTL6Q49A17 601 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 NCBP2-AS2Q69YL0 99 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 EFCAB3Q8N7B9 438 aa10.29□□□□□ -0.76
TOP3A-208ENST00000542570 HIST1H2AHQ96KK5 128 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms