RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 C2orf49Q9BVC5 232 aaPredicted RBP20.32■□□□□ 0.84
DDX11-220ENST00000542244 STK33Q9BYT3 514 aa20.32■□□□□ 0.84
DDX11-220ENST00000542244 NUP62CLQ9H1M0 184 aa20.32■□□□□ 0.84
DDX11-220ENST00000542244 ERVMER34-1Q9H9K5 563 aa20.32■□□□□ 0.84
DDX11-220ENST00000542244 FCF1Q9Y324 198 aaKnown RBP20.32■□□□□ 0.84
DDX11-220ENST00000542244 LEFTY1O75610 366 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 MYF5P13349 255 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 SNX16P57768 344 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 STAT4Q14765 748 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 CCDC14Q49A88 953 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 LEKR1Q6ZMV7 388 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 TMIEQ8NEW7 156 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 OR13H1Q8NG92 308 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 GPT2Q8TD30 523 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 PREBQ9HCU5 417 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 NEU3Q9UQ49 428 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 DMTF1Q9Y222 760 aa20.31■□□□□ 0.84
DDX11-220ENST00000542244 ARID1BQ8NFD5 2236 aaPredicted RBP20.31■□□□□ 0.84
DDX11-220ENST00000542244 PRAMEF26H0Y7S4 382 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 RAD51BO15315 384 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 RFPL3O75679 317 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 F9P00740 461 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 CYP1A1P04798 512 aaPredicted RBP20.3■□□□□ 0.84
DDX11-220ENST00000542244 GIMD1P0DJR0 217 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 ARRB1P49407 418 aaPredicted RBP20.3■□□□□ 0.84
DDX11-220ENST00000542244 PTP4A2Q12974 167 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 MTA1Q13330 715 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 KRT31Q15323 416 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 CDO1Q16878 200 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 INAVAQ3KP66 663 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 SETMARQ53H47 684 aaPredicted RBP20.3■□□□□ 0.84
DDX11-220ENST00000542244 SLC45A4Q5BKX6 768 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 ZNF542PQ5EBM4 170 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 CDKAL1Q5VV42 579 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 FBXL19Q6PCT2 694 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 LRRC31Q6UY01 552 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 GCNT7Q6ZNI0 430 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 PDZD3Q86UT5 571 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 SLC22A18ASQ8N1D0 253 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 NETO2Q8NC67 525 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 RXFP2Q8WXD0 754 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 HAPLN3Q96S86 360 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 PPP1R9BQ96SB3 815 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 NLRC4Q9NPP4 1024 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 DKK4Q9UBT3 224 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 IL36AQ9UHA7 158 aa20.3■□□□□ 0.84
DDX11-220ENST00000542244 ILVBLA1L0T0 632 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 SIGLEC6O43699 453 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 LSM8O95777 96 aaKnown RBP20.29■□□□□ 0.84
DDX11-220ENST00000542244 THEGLP0DJG4 465 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 JAM2P57087 298 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 POLR2FP61218 127 aaKnown RBP20.29■□□□□ 0.84
DDX11-220ENST00000542244 GNA12Q03113 381 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 TARDBPQ13148 414 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDX11-220ENST00000542244 PROX2Q3B8N5 592 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 C6orf118Q5T5N4 469 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 HES3Q5TGS1 186 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 MANEALQ5VSG8 457 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 SMYD5Q6GMV2 418 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 ERN2Q76MJ5 926 aaKnown RBP20.29■□□□□ 0.84
DDX11-220ENST00000542244 IQCHQ86VS3 1027 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 TMPRSS12Q86WS5 348 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 HORMAD1Q86X24 394 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 OR6K2Q8NGY2 324 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 KLHDC7BQ96G42 594 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 C11orf70Q9BRQ4 267 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 ZYG11BQ9C0D3 744 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 FAM207AQ9NSI2 230 aaPredicted RBP20.29■□□□□ 0.84
DDX11-220ENST00000542244 GGT7Q9UJ14 662 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 PCDHGA1Q9Y5H4 931 aa20.29■□□□□ 0.84
DDX11-220ENST00000542244 DOCK4Q8N1I0 1966 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 MMP8P22894 467 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 SERPINH1P50454 418 aaKnown RBP20.28■□□□□ 0.84
DDX11-220ENST00000542244 DNA2P51530 1060 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 TMEM259Q4ZIN3 620 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 SOWAHCQ53LP3 525 aaPredicted RBP20.28■□□□□ 0.84
DDX11-220ENST00000542244 TPRG1LQ5T0D9 272 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 PDCD7Q8N8D1 485 aaKnown RBP20.28■□□□□ 0.84
DDX11-220ENST00000542244 LRIG1Q96JA1 1093 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 BMFQ96LC9 184 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 BBC3Q96PG8 261 aaPredicted RBP20.28■□□□□ 0.84
DDX11-220ENST00000542244 TM6SF2Q9BZW4 377 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 ATP13A1Q9HD20 1204 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 SIK3Q9Y2K2 1263 aa20.28■□□□□ 0.84
DDX11-220ENST00000542244 ACACAQ13085 2346 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 YKT6O15498 198 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 SPINT1O43278 529 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 TLX3O43711 291 aaPredicted RBP20.27■□□□□ 0.84
DDX11-220ENST00000542244 PCDH8O95206 1070 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 JUPP14923 745 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 DGKAP23743 735 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 EEF1GP26641 437 aaKnown RBP20.27■□□□□ 0.84
DDX11-220ENST00000542244 ADRA1BP35368 520 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 CLCN6P51797 869 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 CDR2Q01850 454 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 PARS2Q7L3T8 475 aaKnown RBP20.27■□□□□ 0.84
DDX11-220ENST00000542244 NLRP14Q86W24 1093 aa20.27■□□□□ 0.84
DDX11-220ENST00000542244 PYROXD2Q8N2H3 581 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms