RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 IRX4P78413 519 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SPANXN3Q5MJ09 141 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SNX30Q5VWJ9 437 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 CES4AQ5XG92 561 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 NAPEPLDQ6IQ20 393 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 TIGD7Q6NT04 549 aaPredicted RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SPRED2Q7Z698 418 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 AAR2Q9Y312 384 aaKnown RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 HBS1LQ9Y450 684 aaKnown RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 ANAPC1Q9H1A4 1944 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 F5H5T6 163 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 H3BNC9 293 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 TPP1O14773 563 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 NEBLO76041 1014 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 HSPA8P11142 646 aaKnown RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 WNT3AP56704 352 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SERINC3Q13530 473 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SEPT7Q16181 437 aaKnown RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 MARC1Q5VT66 337 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 TPGS2Q68CL5 300 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 TXNDC8Q6A555 127 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 CMC1Q7Z7K0 106 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 CMTR2Q8IYT2 770 aaKnown RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 MYRFLQ96LU7 910 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 NAT9Q9BTE0 207 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 IL22Q9GZX6 179 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 TRPC7Q9HCX4 862 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 C20orf96Q9NUD7 363 aaPredicted RBP17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 ABCF3Q9NUQ8 709 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 PHTF1Q9UMS5 762 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 REV3LO60673 3130 aa17.53■□□□□ 0.4
TMEM50B-210ENST00000542230 SZT2Q5T011 3432 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 FAM237BA0A1B0GVD1 139 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 XIRP2A4UGR9 3374 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 FGF18O76093 207 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 USP1O94782 785 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 ITGA2BP08514 1039 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 CNPP09543 421 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 DHRS4L1P0CG22 281 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 LAG3P18627 525 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 NPY2RP49146 381 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 HNRNPDQ14103 355 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 TEDDM1Q5T9Z0 273 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 ESRP1Q6NXG1 681 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 KDELC1Q6UW63 502 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 RANBP10Q6VN20 620 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 FAM43BQ6ZT52 329 aaPredicted RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 NECAB2Q7Z6G3 386 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 CCNJLQ8IV13 435 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 CCDC63Q8NA47 563 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 ARMC2Q8NEN0 867 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 LRRC8CQ8TDW0 803 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 ALKBH8Q96BT7 664 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 IARS2Q9NSE4 1012 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 SOX13Q9UN79 622 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 INSL5Q9Y5Q6 135 aa17.52■□□□□ 0.4
TMEM50B-210ENST00000542230 TM9SF1O15321 606 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 LILRB3O75022 631 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 ANXA9O76027 345 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 BGNP21810 368 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 HARS2P49590 506 aaKnown RBP17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 OVGP1Q12889 678 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 DLG2Q15700 870 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 SPATA21Q7Z572 469 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 STRA8Q7Z7C7 330 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 BHMTQ93088 406 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 RMDN2Q96LZ7 410 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 NSMCE3Q96MG7 304 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 FSD1LQ9BXM9 530 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 CAB39LQ9H9S4 337 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 MRPL17Q9NRX2 175 aaKnown RBP17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 ZNF358Q9NW07 568 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 AGO1Q9UL18 857 aaKnown RBP17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 PLLPQ9Y342 182 aa17.52■□□□□ 0.39
TMEM50B-210ENST00000542230 CEP290O15078 2479 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 PDE1CQ14123 709 aaPredicted RBP17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 LGSNQ5TDP6 509 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 OTOAQ7RTW8 1153 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 KCNMB4Q86W47 210 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 TMEM199Q8N511 208 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 ANKLE1Q8NAG6 615 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 CDKL2Q92772 493 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 IMP4Q96G21 291 aaKnown RBP17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 USP15Q9Y4E8 981 aaPredicted RBP17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 KIAA1671Q9BY89 1806 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 MYO1CO00159 1063 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 TGM5O43548 720 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 GJA1P17302 382 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 ARNTP27540 789 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 CCNFP41002 786 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 RENBPP51606 427 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 CORO7P57737 925 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 RNF135Q8IUD6 432 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 ARRDC2Q8TBH0 407 aa17.51■□□□□ 0.39
TMEM50B-210ENST00000542230 SPON2Q9BUD6 331 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms