RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CKAP5Q14008 2032 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 FGF10O15520 208 aaPredicted RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 BUB1O43683 1085 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 RNASEH1O60930 286 aaKnown RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 RNASEH2AO75792 299 aaKnown RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 LCA5LO95447 670 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 IGHV4-34P06331 123 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 C5AR1P21730 350 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 FECHP22830 423 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 CHRNA3P32297 505 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 HTR7P34969 479 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 PAPOLAP51003 745 aaKnown RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 TAS2R38P59533 333 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 CNTN1Q12860 1018 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 MESDQ14696 234 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 RSPO4Q2I0M5 234 aaPredicted RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 CARD16Q5EG05 197 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 ATXN7L2Q5T6C5 722 aaPredicted RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 RETSATQ6NUM9 610 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 OR6K2Q8NGY2 324 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 PIP4K2CQ8TBX8 421 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 GANCQ8TET4 914 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 ARRDC3Q96B67 414 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 BIRC7Q96CA5 298 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 CSPG4P5Q96PW8 444 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 PANX2Q96RD6 677 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 OMDQ99983 421 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 BTBD1Q9H0C5 482 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 CATSPERBQ9H7T0 1116 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 PDFQ9HBH1 243 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 PCDH18Q9HCL0 1135 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 REXO2Q9Y3B8 237 aaKnown RBP9.92□□□□□ -0.82
YBX3-212ENST00000542002 WASF2Q9Y6W5 498 aa9.92□□□□□ -0.82
YBX3-212ENST00000542002 CXorf51AA0A1B0GTR3 108 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 LNP1A1A4G5 178 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 FAM47DPA6NHR8 397 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TMEM110-MUSTN1A8MSY1 372 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 EIF3CLB5ME19 914 aaKnown RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 CDX4O14627 284 aaPredicted RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 WNT9AO14904 365 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 INSIG1O15503 277 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 DAPK3O43293 454 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 LEFTY1O75610 366 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 MTA2O94776 668 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 SEMA4FO95754 770 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 ADH1BP00325 375 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 DESP17661 470 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 MAGEA1P43355 309 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 DNA2P51530 1060 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 NDST2P52849 883 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 ADPRHP54922 357 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 YBEYP58557 167 aaPredicted RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 BNC1Q01954 994 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 DPYSL3Q14195 570 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TCEAL1Q15170 157 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 PARP15Q460N3 678 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TRIM61Q5EBN2 209 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 PIP5KL1Q5T9C9 394 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 AGBL4Q5VU57 503 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 SLC23A3Q6PIS1 610 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 NCEH1Q6PIU2 408 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 RAD9BQ6WBX8 426 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TMEM139Q8IV31 216 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TMIEQ8NEW7 156 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 GRIN3AQ8TCU5 1115 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TEKT4Q8WW24 435 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 OR8D1Q8WZ84 308 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 RAPGEF5Q92565 580 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 ISG20Q96AZ6 181 aaKnown RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 NSMCE3Q96MG7 304 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 EIF3CQ99613 913 aaKnown RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 TM6SF2Q9BZW4 377 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 CEP44Q9C0F1 390 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 SGK2Q9HBY8 427 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 CAPN10Q9HC96 672 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 DLL3Q9NYJ7 618 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 HECAQ9UBI9 543 aaPredicted RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 EIF2B4Q9UI10 523 aaKnown RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 SALL4Q9UJQ4 1053 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 NCKAP1Q9Y2A7 1128 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 EPN1Q9Y6I3 576 aaPredicted RBP9.91□□□□□ -0.82
YBX3-212ENST00000542002 DUSP10Q9Y6W6 482 aa9.91□□□□□ -0.82
YBX3-212ENST00000542002 FAM186AA6NE01 2351 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 DOCK4Q8N1I0 1966 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 A0A0U1RQJ8 604 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 C3orf70A6NLC5 250 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms