RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 OLFM3Q96PB7 478 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 TRIM62Q9BVG3 475 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 GATA5Q9BWX5 397 aaPredicted RBP16.33■□□□□ 0.21
VARS2-212ENST00000542001 GRIP2Q9C0E4 1043 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 COPG2Q9UBF2 871 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 MYO1GB0I1T2 1018 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 HACD1B0YJ81 288 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 PLIN3O60664 434 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 GRK4P32298 578 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 NFYCQ13952 458 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 PITRM1Q5JRX3 1037 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 PQLC3Q8N755 202 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 TRPC4APQ8TEL6 797 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 SNX19Q92543 992 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 IL22Q9GZX6 179 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 MARCH2Q9P0N8 246 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 TRMT6Q9UJA5 497 aaKnown RBP16.33■□□□□ 0.2
VARS2-212ENST00000542001 PPME1Q9Y570 386 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 ORC6Q9Y5N6 252 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 NRP1O14786 923 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 NCAM2O15394 837 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 PIGRP01833 764 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 RENBPP51606 427 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 ACOX2Q99424 681 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 NSMCE4AQ9NXX6 385 aa16.33■□□□□ 0.2
VARS2-212ENST00000542001 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 MEIS3P2A8K0S8 358 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 FKBP6O75344 327 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TBX18O95935 607 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 APOA4P06727 396 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 CKMP06732 381 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 ELNP15502 786 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 ME2P23368 584 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 GABRB2P47870 512 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 DNAJB14Q8TBM8 379 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 RNF217Q8TC41 542 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 MAML3Q96JK9 1138 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 ZNF333Q96JL9 665 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 CCDC134Q9H6E4 229 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 RHBDL2Q9NX52 303 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 VPS28Q9UK41 221 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 BCLAF3A2AJT9 711 aaKnown RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 ZNF839A8K0R7 811 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 SYCE1LA8MT33 242 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 NPY2RP49146 381 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 VEPH1Q14D04 833 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TARBP2Q15633 366 aaKnown RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 MAPRE1Q15691 268 aaKnown RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 CLEC6AQ6EIG7 209 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 DRICH1Q6PGQ1 229 aaPredicted RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 GK5Q6ZS86 529 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 FTHL17Q9BXU8 183 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TXLNGYQ9BZA5 131 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 FZD9O00144 591 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 GSSP48637 474 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TEX44Q53QW1 395 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
VARS2-212ENST00000542001 TAF2Q6P1X5 1199 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 THAP11Q96EK4 314 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 RUBCNLQ9H714 662 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 TRHDEQ9UKU6 1024 aa16.32■□□□□ 0.2
VARS2-212ENST00000542001 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 HDAC3O15379 428 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 MPOP05164 745 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 FGFR1P11362 822 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 AKR1A1P14550 325 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 CDH18Q13634 790 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 GTF2H3Q13889 308 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TTC33Q6PID6 262 aaPredicted RBP16.31■□□□□ 0.2
VARS2-212ENST00000542001 TMEM79Q9BSE2 394 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 C17orf80Q9BSJ5 609 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
VARS2-212ENST00000542001 OR51F1A6NGY5 319 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 AP3B1O00203 1094 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 BTN3A1O00481 513 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 SERPINA6P08185 405 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 SERPINF2P08697 491 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 ATP6V1C1P21283 382 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 INPP5AQ14642 412 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TBCCQ15814 346 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 ZNF280DQ6N043 979 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TDRPQ86YL5 185 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 C1orf50Q9BV19 199 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 PLK2Q9NYY3 685 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TEX264Q9Y6I9 313 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TMEM233B4DJY2 109 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 F8W8V4 182 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 PSMC3P17980 439 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 KLF10Q13118 480 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 OLFML1Q6UWY5 402 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 TAC4Q86UU9 113 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 PTGR2Q8N8N7 351 aaPredicted RBP16.31■□□□□ 0.2
VARS2-212ENST00000542001 DQX1Q8TE96 717 aaKnown RBP16.31■□□□□ 0.2
VARS2-212ENST00000542001 ECSITQ9BQ95 431 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms