RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 DYRK3O43781 588 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 CYP7B1O75881 506 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ATG7O95352 703 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 XRCC1P18887 633 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 AZGP1P25311 298 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 RCVRNP35243 200 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 HTR2BP41595 481 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SLC7A2P52569 658 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PPATQ06203 517 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 NSUN2Q08J23 767 aaKnown RBP eCLIP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SF3B4Q15427 424 aaKnown RBP eCLIP11.16□□□□□ -0.621e-6■■■■■ 26.8
ERBB2-204ENST00000541774 DDR2Q16832 855 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ARHGEF16Q5VV41 709 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PAOXQ6QHF9 649 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SLFN11Q7Z7L1 901 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 EID3Q8N140 333 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 AKAP1Q92667 903 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■■■■■ 28.4
ERBB2-204ENST00000541774 A0A0B4J269 797 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 KMOO15229 486 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 DENRO43583 198 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 VARSP26640 1264 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SDC4P31431 198 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 GNL1P36915 607 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 HNRNPFP52597 415 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 STK11Q15831 433 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 FGD3Q5JSP0 725 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 NLRX1Q86UT6 975 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ITIH5Q86UX2 942 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PGAM4Q8N0Y7 254 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 HEXIM2Q96MH2 286 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 POLR3BQ9NW08 1133 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 RNF181Q9P0P0 153 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PCDHGC3Q9UN70 934 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 NDUFAF1Q9Y375 327 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 TCRBV9S1A1TA0A576 114 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 MAGEB16A2A368 324 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 A6NL46 340 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 DFFAO00273 331 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ZNF37AP17032 561 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 TBXAS1P24557 533 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 NAGLUP54802 743 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 RAP1GAP2Q684P5 730 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ANKRD13BQ86YJ7 626 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 OTULINQ96BN8 352 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 MED30Q96HR3 178 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SH2D3AQ9BRG2 576 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SIAEQ9HAT2 523 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SLC35C2Q9NQQ7 365 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 GNB5O14775 395 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 AXIN1O15169 862 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 VILLO15195 856 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 TGM2P21980 687 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 AVPR1AP37288 418 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 THOP1P52888 689 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ENPEPQ07075 957 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 TNK2Q07912 1038 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 MERTKQ12866 999 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 UGP2Q16851 508 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 ZSWIM7Q19AV6 140 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 IL23RQ5VWK5 629 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 THAP5Q7Z6K1 395 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PNMA5Q96PV4 448 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 SSU72Q9NP77 194 aaKnown RBP11.16□□□□□ -0.62
ERBB2-204ENST00000541774 PNPLA8Q9NP80 782 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 CSADQ9Y600 493 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
ERBB2-204ENST00000541774 NDUFS2O75306 463 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 PCNAP12004 261 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ATF6P18850 670 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ATP6V1E1P36543 226 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 HADHAP40939 763 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 RPS9P46781 194 aaKnown RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 RAB25P57735 213 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 SLC13A2Q13183 592 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 SMUG1Q53HV7 270 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.623e-8■■■□□ 18.8
ERBB2-204ENST00000541774 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ERAP2Q6P179 960 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 SPESP1Q6UW49 350 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 STRA8Q7Z7C7 330 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 BANPQ8N9N5 519 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 CEP170P1Q96L14 293 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 NODALQ96S42 347 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 C1orf21Q9H246 121 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ZNF556Q9HAH1 456 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 CATSPERZQ9NTU4 200 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 COMMD8Q9NX08 183 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 SAE1Q9UBE0 346 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms