RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 VPS4AQ9UN37 437 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 MED14O60244 1454 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 EEA1Q15075 1411 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 FNDC1Q4ZHG4 1894 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 ABCA6Q8N139 1617 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TSPY2A6NKD2 308 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TTC34A8MYJ7 566 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 SYN3O14994 580 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CA12O43570 354 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 AHCYL1O43865 530 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CBFA2T3O75081 653 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CLEC3BP05452 202 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TSPY3P0CV98 308 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TSPY8P0CW00 308 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 MATN1P21941 496 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 COPB2P35606 906 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ACTN2P35609 894 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 PPARGP37231 505 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 MLH1P40692 756 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CPA2P48052 419 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TAS2R50P59544 299 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 RPS3AP61247 264 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TSPY1Q01534 308 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TLE3Q04726 772 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 MTAPQ13126 283 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ALKBH1Q13686 389 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 PAPD7Q5XG87 772 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 FAM90A2PQ658T7 463 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF425Q6IV72 752 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 H1FNTQ75WM6 255 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 C1QL2Q7Z5L3 287 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 GALNT5Q7Z7M9 940 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ADSSL1Q8N142 457 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 C8orf58Q8NAV2 365 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ADPRHL1Q8NDY3 354 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 NPIPB3Q92617 1050 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 SMARCE1Q969G3 411 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 JAKMIP2Q96AA8 810 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 CCDC17Q96LX7 622 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 FYTTD1Q96QD9 318 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 MAK16Q9BXY0 300 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 RANBP17Q9H2T7 1088 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 SMARCAD1Q9H4L7 1026 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 USP29Q9HBJ7 922 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 BEX4Q9NWD9 120 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TBC1D14Q9P2M4 693 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF215Q9UL58 517 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 LYVE1Q9Y5Y7 322 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 PLEKHH2Q8IVE3 1493 aa4.53□□□□□ -1.68
SNHG1-217ENST00000541578 NPHP4O75161 1426 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TROQ12816 1431 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 RNF17Q9BXT8 1623 aaKnown RBP4.53□□□□□ -1.68
SNHG1-217ENST00000541578 TNRQ92752 1358 aa4.53□□□□□ -1.69
SNHG1-217ENST00000541578 CFAP65Q6ZU64 1925 aaKnown RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 A2MP01023 1474 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 NLRP1Q9C000 1473 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 CCDC187A0A096LP49 1063 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 TCRBV5S1A1TA0A578 114 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 TTC36A6NLP5 189 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 PTGES3LE9PB15 166 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 GRM8O00222 908 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 CYP21A2P08686 494 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 PEPDP12955 493 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 ACP5P13686 325 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 AKR1B1P15121 316 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SLC8A1P32418 973 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 FAM3BP58499 235 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 PSG6Q00889 435 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 MC1RQ01726 317 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 CDK18Q07002 472 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 FHL3Q13643 280 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SUPT20HL1Q3ZLR7 823 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SPECC1Q5M775 1068 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SNX30Q5VWJ9 437 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 MORN5Q5VZ52 161 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 ACSM6Q6P461 480 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 PTCHD4Q6ZW05 846 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 BCDIN3DQ7Z5W3 292 aaKnown RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 PXKQ7Z7A4 578 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 CNTROBQ8N137 903 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 C17orf53Q8N3J3 647 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SRBD1Q8N5C6 995 aaKnown RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 LSMEM1Q8N8F7 131 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 GPATCH11Q8N954 259 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 OR52L2PQ8NGH6 319 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SCARB1Q8WTV0 552 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 RUFY2Q8WXA3 655 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 MASTLQ96GX5 879 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms