RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 CCL5P13501 91 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 GPR15P49685 360 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 PGM2L1Q6PCE3 622 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 MARK2Q7KZI7 788 aaKnown RBP17.48■□□□□ 0.39
SPIDR-227ENST00000541342 ADGRG6Q86SQ4 1221 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 TKTL2Q9H0I9 626 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 RNF208Q9H0X6 261 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 PNPOQ9NVS9 261 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 ADAMTS6Q9UKP5 1117 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 IGLV3-25P01717 112 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 IDH3AP50213 366 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 MSLNQ13421 630 aaPredicted RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 EIF4EBP2Q13542 120 aaPredicted RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PAFAH1B3Q15102 231 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SMAD1Q15797 465 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 C6orf163Q5TEZ5 329 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 VWA5B1Q5TIE3 1220 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 CYS1Q717R9 158 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 TFB1MQ8WVM0 346 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 ARNTL2Q8WYA1 636 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 WDCPQ9H6R7 721 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 IL1RAPL1Q9NZN1 696 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 TBC1D30Q9Y2I9 924 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PBX3P40426 434 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SLC11A1P49279 550 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 CCL23P55773 120 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PEX6Q13608 980 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SFT2D3Q587I9 215 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 FAM171A1Q5VUB5 890 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PACS1Q6VY07 963 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SCD5Q86SK9 330 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PDSS2Q86YH6 399 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 C10orf107Q8IVU9 208 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SCN4BQ8IWT1 228 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SHCBP1LQ9BZQ2 653 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PLXNA3P51805 1871 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SYN3O14994 580 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PDE5AO76074 875 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 F9P00740 461 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 POLE2P56282 527 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 MRPL58Q14197 206 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 HEATR6Q6AI08 1181 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 DHDDSQ86SQ9 333 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 WDR75Q8IWA0 830 aaKnown RBP17.47■□□□□ 0.39
SPIDR-227ENST00000541342 HTR3CQ8WXA8 447 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SIKE1Q9BRV8 207 aa17.47■□□□□ 0.39
SPIDR-227ENST00000541342 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.398e-7■■■■■ 141.1
SPIDR-227ENST00000541342 FKBP6O75344 327 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 ERCC2P18074 760 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-227ENST00000541342 DBN1Q16643 649 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 LRRC36Q1X8D7 754 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 TTC9BQ8N6N2 239 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 NMUR1Q9HB89 426 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 HACD1B0YJ81 288 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 NT5C1B-RDH14C9J2C7 533 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 CNTFP26441 200 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 CALRP27797 417 aaKnown RBP17.46■□□□□ 0.39
SPIDR-227ENST00000541342 DDR2Q16832 855 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 LPCAT4Q643R3 524 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 AAGABQ6PD74 315 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 TMEM173Q86WV6 379 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-227ENST00000541342 DCP1BQ8IZD4 617 aaKnown RBP17.46■□□□□ 0.39
SPIDR-227ENST00000541342 FAM192AQ9GZU8 254 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 ZDHHC7Q9NXF8 308 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 LRFN2Q9ULH4 789 aa17.46■□□□□ 0.39
SPIDR-227ENST00000541342 MICAL3Q7RTP6 2002 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.46■□□□□ 0.38
SPIDR-227ENST00000541342 PROCP04070 461 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 ALOX15P16050 662 aaPredicted RBP17.46■□□□□ 0.38
SPIDR-227ENST00000541342 BEND5Q7L4P6 421 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 PHTF2Q8N3S3 785 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 NPWQ8N729 165 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 OR6Y1Q8NGX8 325 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 PPP1R14CQ8TAE6 165 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 OXCT2Q9BYC2 517 aaPredicted RBP17.46■□□□□ 0.38
SPIDR-227ENST00000541342 HIPK3Q9H422 1215 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 OSER1Q9NX31 292 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 CDH22Q9UJ99 828 aa17.46■□□□□ 0.38
SPIDR-227ENST00000541342 ARHGAP42A6NI28 874 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 CD1EP15812 388 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 COPAP53621 1224 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 TPI1P60174 286 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ARL13BQ3SXY8 428 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ACMSDQ8TDX5 336 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 STN1Q9H668 368 aaKnown RBP17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 OR12D3Q9UGF7 316 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 EPHB1P54762 984 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 AP1ARQ63HQ0 302 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 RSPO2Q6UXX9 243 aaPredicted RBP17.45■□□□□ 0.38
SPIDR-227ENST00000541342 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms