RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 ATXN1P54253 815 aaKnown RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 PMS2P3Q13401 168 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 DPYSQ14117 519 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 DUOXA2Q1HG44 320 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 CCDC153Q494R4 210 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 CCDC14Q49A88 953 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 AARS2Q5JTZ9 985 aaKnown RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 FAM160B1Q5W0V3 765 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 FAM219BQ5XKK7 198 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 C16orf87Q6PH81 154 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 DNAJC14Q6Y2X3 702 aaPredicted RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 TMEM26Q6ZUK4 368 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 TRAPPC12Q8WVT3 735 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 COPS5Q92905 334 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 COG8Q96MW5 612 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 AGAP2Q99490 1192 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 GPR20Q99678 358 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 GPATCH1Q9BRR8 931 aaKnown RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 RPF2Q9H7B2 306 aaKnown RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 SLC8A2Q9UPR5 921 aa15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 COPG1Q9Y678 874 aaKnown RBP15.09■□□□□ 0.01
AC005840.4-201ENST00000541242 SAC3D1A6NKF1 404 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 TRIM38O00635 465 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 NRP1O14786 923 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 HDAC3O15379 428 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 MED7O43513 233 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 GCATO75600 419 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 TGFB3P10600 412 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 CYP2F1P24903 491 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 GRM5P41594 1212 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ESRRGP62508 458 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 TUBA4AP68366 448 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ZBED5Q49AG3 693 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ARL13AQ5H913 290 aaPredicted RBP15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ZBTB49Q6ZSB9 765 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 DDHD1Q8NEL9 900 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 LPGAT1Q92604 370 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 TANKQ92844 425 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 BORCS5Q969J3 196 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 FCRL3Q96P31 734 aaPredicted RBP15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ELOVL4Q9GZR5 314 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 HIPK3Q9H422 1215 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ZNF385DQ9H6B1 395 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 ZBTB26Q9HCK0 441 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 TRIM17Q9Y577 477 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 CORINQ9Y5Q5 1042 aa15.08■□□□□ 0.01
AC005840.4-201ENST00000541242 A0A096LPK6 155 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 MCF2P10911 925 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 CCDC130P13994 396 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 TFEBP19484 476 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 SAT1P21673 171 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 GPD2P43304 727 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 GLRBP48167 497 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 RPL14P50914 215 aaKnown RBP15.08■□□□□ 0
AC005840.4-201ENST00000541242 LAMTOR4Q0VGL1 99 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 ZNF829Q3KNS6 432 aaPredicted RBP15.08■□□□□ 0
AC005840.4-201ENST00000541242 NHSL2Q5HYW2 709 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 FSTL4Q6MZW2 842 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 MAMDC4Q6UXC1 1216 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 SETD3Q86TU7 594 aaPredicted RBP15.08■□□□□ 0
AC005840.4-201ENST00000541242 BRD8Q9H0E9 1235 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 CXorf21Q9HAI6 301 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 VPS45Q9NRW7 570 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 RNF181Q9P0P0 153 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 PCDHGA7Q9Y5G6 932 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 ANK1P16157 1881 aa15.08■□□□□ 0
AC005840.4-201ENST00000541242 GRIA4P48058 902 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 KPNA1P52294 538 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 PSME3P61289 254 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 PTPN11Q06124 597 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 SEMA5AQ13591 1074 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 TRIM25Q14258 630 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 TTC33Q6PID6 262 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 DCLRE1AQ6PJP8 1040 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 LAYNQ6UX15 382 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 CHSY3Q70JA7 882 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 CDKL3Q8IVW4 592 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 FBXO16Q8IX29 292 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 RNF149Q8NC42 400 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 ASB9Q96DX5 294 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 CCDC97Q96F63 343 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 LGMNQ99538 433 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 HNRNPABQ99729 332 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 NPLQ9BXD5 320 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 ANKRD60Q9BZ19 345 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 UNKQ9C0B0 810 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 CNOT6Q9ULM6 557 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 FIS1Q9Y3D6 152 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 ZNF839A8K0R7 811 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 GP5P40197 560 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 NME3Q13232 169 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 CCDC92Q53HC0 331 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 PITRM1Q5JRX3 1037 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 CELF3Q5SZQ8 465 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 HEATR6Q6AI08 1181 aaKnown RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 CHST15Q7LFX5 561 aaPredicted RBP15.07■□□□□ 0
AC005840.4-201ENST00000541242 STRA8Q7Z7C7 330 aa15.07■□□□□ 0
AC005840.4-201ENST00000541242 ERO1BQ86YB8 467 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms