RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
YBX3-210ENST00000540975 ERV3-1Q14264 604 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 IL13RA2Q14627 380 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 HEPHL1Q6MZM0 1159 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 DENND1BQ6P3S1 775 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 ANKRD44Q8N8A2 993 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 CEP76Q8TAP6 659 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 KLHL31Q9H511 634 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 NCKIPSDQ9NZQ3 722 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 NLKQ9UBE8 527 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 RRP7AQ9Y3A4 280 aaKnown RBP6.47□□□□□ -1.37
YBX3-210ENST00000540975 A0A1B0GVT2 93 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 OR6C68A6NDL8 312 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 DDTLA6NHG4 134 aaPredicted RBP6.46□□□□□ -1.38
YBX3-210ENST00000540975 OR6C75A6NL08 312 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 INAFM1C9JVW0 142 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 SPRY3O43610 288 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 HOXA11P31270 313 aaPredicted RBP6.46□□□□□ -1.38
YBX3-210ENST00000540975 DPP6P42658 865 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 KCNJ4P48050 445 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 PPP3CCP48454 512 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 ENTPD1P49961 510 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 TBC1D9BQ66K14 1250 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 SERPINA11Q86U17 422 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 SETD9Q8NE22 299 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 CEP70Q8NHQ1 597 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 RNFT2Q96EX2 444 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 COG8Q96MW5 612 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 ZPBPQ9BS86 351 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 PPCSQ9HAB8 311 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 NOD2Q9HC29 1040 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 GRHL1Q9NZI5 618 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 HDAC6Q9UBN7 1215 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 SEL1LQ9UBV2 794 aa6.46□□□□□ -1.38
YBX3-210ENST00000540975 EVPLQ92817 2033 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 RGS14O43566 566 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 CBX6O95503 412 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 ENO3P13929 434 aaPredicted RBP6.45□□□□□ -1.38
YBX3-210ENST00000540975 HNF1BP35680 557 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 PMS2P54278 862 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 GPS2Q13227 327 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 FBXO47Q5MNV8 452 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 OTUD1Q5VV17 481 aaPredicted RBP6.45□□□□□ -1.38
YBX3-210ENST00000540975 LDHAL6AQ6ZMR3 332 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 TRILQ7L0X0 811 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 MEPCEQ7L2J0 689 aaKnown RBP6.45□□□□□ -1.38
YBX3-210ENST00000540975 CADM3Q8N126 398 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 THOC3Q96J01 351 aaKnown RBP6.45□□□□□ -1.38
YBX3-210ENST00000540975 ISCA1Q9BUE6 129 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 NPLQ9BXD5 320 aaPredicted RBP6.45□□□□□ -1.38
YBX3-210ENST00000540975 CATSPERBQ9H7T0 1116 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 RASSF1Q9NS23 344 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 FBXO40Q9UH90 709 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 PCDHGB3Q9Y5G1 929 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 PTGDR2Q9Y5Y4 395 aa6.45□□□□□ -1.38
YBX3-210ENST00000540975 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
YBX3-210ENST00000540975 HOXC6P09630 235 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 HOXD3P31249 432 aaPredicted RBP6.44□□□□□ -1.38
YBX3-210ENST00000540975 PTPN9P43378 593 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 GOLGA8FQ08AF8 430 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 Q0VFX4 171 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 EFR3AQ14156 821 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 FNBP1LQ5T0N5 605 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 UBAP2Q5T6F2 1119 aaKnown RBP6.44□□□□□ -1.38
YBX3-210ENST00000540975 GJB7Q6PEY0 223 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 Q6ZSV7 163 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 C2CD5Q86YS7 1000 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 FBXL14Q8N1E6 418 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 IQCF1Q8N6M8 205 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 MIB2Q96AX9 1013 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 ZNF479Q96JC4 524 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 TMEM204Q9BSN7 226 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 RAI2Q9Y5P3 530 aa6.44□□□□□ -1.38
YBX3-210ENST00000540975 FAM157AC9JC47 383 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 MS4A18H0YCH9 400 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 KIF1CO43896 1103 aaKnown RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 NGFRP08138 427 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 CNPP09543 421 aaKnown RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 GNLYP22749 145 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 RFC1P35251 1148 aaPredicted RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 PAPOLAP51003 745 aaKnown RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 CDH12P55289 794 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 ABATP80404 500 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 SLC4A8Q2Y0W8 1093 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 FBXO43Q4G163 708 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 DNTTIP2Q5QJE6 756 aaKnown RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 NAPEPLDQ6IQ20 393 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 PDXDC1Q6P996 788 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.43□□□□□ -1.38
YBX3-210ENST00000540975 TEX45Q8NA69 505 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 SLC35F5Q8WV83 523 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 DCLK3Q9C098 648 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 CXorf56Q9H5V9 222 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 ATP8A2Q9NTI2 1148 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 CLDN16Q9Y5I7 305 aa6.43□□□□□ -1.38
YBX3-210ENST00000540975 CKAP5Q14008 2032 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 ANP32CO43423 234 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 LIASO43766 372 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms