RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TMEM161AQ9NX61 479 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FCF1Q9Y324 198 aaKnown RBP9.69□□□□□ -0.86
TTC39C-203ENST00000540918 ZFP37Q9Y6Q3 630 aaPredicted RBP9.69□□□□□ -0.86
TTC39C-203ENST00000540918 NAV1Q8NEY1 1877 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 CFAP99D6REC4 459 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM72CH0Y354 149 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 CCNT2O60583 730 aaKnown RBP9.69□□□□□ -0.86
TTC39C-203ENST00000540918 L1CAMP32004 1257 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 ACOX1Q15067 660 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 QPCTQ16769 361 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 PFKFB4Q16877 469 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FNDC3BQ53EP0 1204 aaKnown RBP9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM72AQ5TYM5 149 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM72DQ6L9T8 149 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM151BQ6UXP7 276 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 NUDT18Q6ZVK8 323 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM124AQ86V42 546 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 FAM72BQ86X60 149 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 LZTR1Q8N653 840 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 ESAMQ96AP7 390 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 MAGEB18Q96M61 343 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 AGAP2Q99490 1192 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 ASB8Q9H765 288 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
TTC39C-203ENST00000540918 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 RNF103-CHMP3A0A140T963 221 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 OR51F1A6NGY5 319 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 AP3B1O00203 1094 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ANGPT2O15123 496 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 INPP4BO15327 924 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 DCXO43602 365 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SEC24DO94855 1032 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 C8AP07357 584 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ITGALP20701 1170 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 LBX1P52954 281 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 PTPRNQ16849 979 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 PABPC1LQ4VXU2 614 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ATXN7L2Q5T6C5 722 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 OLFML1Q6UWY5 402 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 GET4Q7L5D6 327 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SERINC5Q86VE9 423 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SLC44A2Q8IWA5 706 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 HBEGFQ99075 208 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SPATA16Q9BXB7 569 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 UBE2OQ9C0C9 1292 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SLC39A8Q9C0K1 460 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 TLE6Q9H808 572 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SEMA4BQ9NPR2 832 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 CNTN3Q9P232 1028 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SLC45A1Q9Y2W3 748 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 IGKV6-21A0A0C4DH24 114 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 OR6C75A6NL08 312 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 E2F6O75461 281 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 EEF1B2P24534 225 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SLC8A1P32418 973 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 USP4Q13107 963 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SEMA5AQ13591 1074 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 MAP3K21Q5TCX8 1036 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 TRMT11Q7Z4G4 463 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 OR10T2Q8NGX3 314 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 PGM2Q96G03 612 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 MED8Q96G25 268 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 BCO2Q9BYV7 579 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 DCDC2Q9UHG0 476 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 BCAP29Q9UHQ4 241 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ALOX15BO15296 676 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 CHADO15335 359 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 UGT2B4P06133 528 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 KPNA1P52294 538 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 LRRC74AQ0VAA2 488 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 GTF2H3Q13889 308 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 RASA2Q15283 850 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ESRP1Q6NXG1 681 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ZDHHC24Q6UX98 284 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 ARHGAP36Q6ZRI8 547 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 GALNT4Q8N4A0 578 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 N4BP2L2Q92802 583 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 MTBPQ96DY7 904 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 TBATAQ96M53 351 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 SERPINI1Q99574 410 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 C2orf49Q9BVC5 232 aaPredicted RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 NMRAL1Q9HBL8 299 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 CD84Q9UIB8 345 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 AGO1Q9UL18 857 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 GNEQ9Y223 722 aaKnown RBP9.68□□□□□ -0.86
TTC39C-203ENST00000540918 CDYLQ9Y232 598 aa9.68□□□□□ -0.86
TTC39C-203ENST00000540918 TRAV19A0A0A6YYK7 116 aa9.67□□□□□ -0.86
TTC39C-203ENST00000540918 KCNU1A8MYU2 1149 aa9.67□□□□□ -0.86
TTC39C-203ENST00000540918 CNTN5O94779 1100 aa9.67□□□□□ -0.86
TTC39C-203ENST00000540918 WARSP23381 471 aaKnown RBP9.67□□□□□ -0.86
TTC39C-203ENST00000540918 MAP2K2P36507 400 aa9.67□□□□□ -0.86
TTC39C-203ENST00000540918 SLC1A6P48664 564 aa9.67□□□□□ -0.86
TTC39C-203ENST00000540918 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
TTC39C-203ENST00000540918 MPP1Q00013 466 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms