RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 ANKRD13AQ8IZ07 590 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 RORBQ92753 470 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 PARVBQ9HBI1 364 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 MID1IP1Q9NPA3 183 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 ASNA1O43681 348 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 NRP2O60462 931 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 ARL2P36404 184 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 STK32CQ86UX6 486 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 ZNF513Q8N8E2 541 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-203ENST00000540357 SEPT8Q92599 483 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 LPGAT1Q92604 370 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
DNMT1-203ENST00000540357 A0A087WZ62 844 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 C2CD4BA6NLJ0 364 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 PIGRP01833 764 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 HOXB8P17481 243 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 LBPP18428 481 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 NOS2P35228 1153 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 ADIGQ0VDE8 80 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 FBXO47Q5MNV8 452 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 PTAR1Q7Z6K3 402 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 SETD9Q8NE22 299 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 CSPG4P5Q96PW8 444 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 EIF3LQ9Y262 564 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TIPRLO75663 272 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 PCSK1P29120 753 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 CDK9P50750 372 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 SLC7A2P52569 658 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 OGDHQ02218 1023 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 FRMD7Q6ZUT3 714 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 LRTOMTQ8WZ04 291 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 RHOBTB2Q9BYZ6 727 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 COQ10BQ9H8M1 238 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 SLC38A7Q9NVC3 462 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 DHX15O43143 795 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 INAQ16352 499 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 ARL13AQ5H913 290 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 CDT1Q9H211 546 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 ZNF395Q9H8N7 513 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TPRKBQ9Y3C4 175 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TKTL1P51854 596 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 MAPK10P53779 464 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 GBE1Q04446 702 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 DALRD3Q5D0E6 543 aaKnown RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TAS2R42Q7RTR8 314 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TUBA8Q9NY65 449 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 POLG2Q9UHN1 485 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 CCDC88AQ3V6T2 1871 aa13.18□□□□□ -0.3
DNMT1-203ENST00000540357 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-203ENST00000540357 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
DNMT1-203ENST00000540357 TADA2AO75478 443 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
DNMT1-203ENST00000540357 DHRS4L1P0CG22 281 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 GRIK1P39086 918 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 TUBA4AP68366 448 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 DAB2P98082 770 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 ILDR2Q71H61 639 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 EID3Q8N140 333 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 TRMOQ9BU70 441 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 CXorf21Q9HAI6 301 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 HARS2P49590 506 aaKnown RBP13.17□□□□□ -0.3
DNMT1-203ENST00000540357 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 EPGNQ6UW88 154 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 CDC26Q8NHZ8 85 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 WNT8BQ93098 351 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 ASB9Q96DX5 294 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 GLIS2Q9BZE0 524 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-203ENST00000540357 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
DNMT1-203ENST00000540357 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms