RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CCDC170Q8IYT3 715 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 AADATQ8N5Z0 425 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 LZTR1Q8N653 840 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 DEFB119Q8N690 84 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 TMIEQ8NEW7 156 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 HMCESQ96FZ2 354 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 BTBD6Q96KE9 485 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 PANX2Q96RD6 677 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 NUSAP1Q9BXS6 441 aaKnown RBP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 CDV3Q9UKY7 258 aaKnown RBP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 ATXN2Q99700 1313 aaKnown RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 CFAP54Q96N23 3096 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 LNP1A1A4G5 178 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 LRRC72A6NJI9 287 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 BUB1O43683 1085 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 BNIP3LO60238 219 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 MTA2O94776 668 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 CD160O95971 181 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 GSRP00390 522 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 SERPINF2P08697 491 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 ERCC2P18074 760 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 CHRNA3P32297 505 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 DRD3P35462 400 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 ARHGAP25P42331 645 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 SMTNL2Q2TAL5 461 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 INO80DQ53TQ3 878 aaPredicted RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 KCNT1Q5JUK3 1230 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 DCAF12L1Q5VU92 463 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 RGL4Q8IZJ4 473 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 HDDC3Q8N4P3 179 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 OR2T34Q8NGX1 318 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 HSPH1Q92598 858 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 PPP1R16AQ96I34 528 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 SMOC1Q9H4F8 434 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 TMEM74BQ9NUR3 256 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 CWC15Q9P013 229 aaKnown RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 RCOR3Q9P2K3 495 aaPredicted RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 SERGEFQ9UGK8 458 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 IL36AQ9UHA7 158 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
CCDC130-202ENST00000540216 SPTBN4Q9H254 2564 aa13.65□□□□□ -0.22
CCDC130-202ENST00000540216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 ZNF821O75541 412 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 LCA5LO95447 670 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 CFIP05156 583 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 KRT7P08729 469 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 TCF4P15884 667 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 FECHP22830 423 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 CDC25BP30305 580 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 CYLC1P35663 651 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SSR1P43307 286 aaKnown RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 ADPRHP54922 357 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 TCEAL1Q15170 157 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SPA17Q15506 151 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 AFMIDQ63HM1 303 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 KIAA0895LQ68EN5 471 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 TCEAL6Q6IPX3 200 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 DPY19L3Q6ZPD9 716 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 OR2AP1Q8NGE2 309 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 TCEAL3Q969E4 200 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 HEPHQ9BQS7 1158 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 EDEM2Q9BV94 578 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 KLC2Q9H0B6 622 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 TNKS2Q9H2K2 1166 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 C6orf106Q9H6K1 298 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-202ENST00000540216 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 PCDH18Q9HCL0 1135 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 OSGEPQ9NPF4 335 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 DLL3Q9NYJ7 618 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SARDHQ9UL12 918 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 NUMA1Q14980 2115 aa13.64□□□□□ -0.23
CCDC130-202ENST00000540216 PI4KAP42356 2102 aa13.63□□□□□ -0.23
CCDC130-202ENST00000540216 DMDP11532 3685 aa13.63□□□□□ -0.23
CCDC130-202ENST00000540216 A0A1B0GTW7 788 aa13.63□□□□□ -0.23
CCDC130-202ENST00000540216 PATE3B3GLJ2 98 aa13.63□□□□□ -0.23
CCDC130-202ENST00000540216 KPNA3O00505 521 aaPredicted RBP13.63□□□□□ -0.23
CCDC130-202ENST00000540216 SLC30A4O14863 429 aa13.63□□□□□ -0.23
CCDC130-202ENST00000540216 PLRG1O43660 514 aaKnown RBP13.63□□□□□ -0.23
CCDC130-202ENST00000540216 PRAMEF11O60813 436 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms