RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SMIM35A0A1B0GVV1 85 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 PSEN1P49768 467 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 CSHL1Q14406 222 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 ZNF470Q6ECI4 717 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SCN4BQ8IWT1 228 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SLC45A3Q96JT2 553 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 KLHL5Q96PQ7 755 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 EPAS1Q99814 870 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 GBA3Q9H227 469 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 STRNO43815 780 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 GJB3O75712 270 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 XRCC1P18887 633 aaPredicted RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 PIK3R1P27986 724 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 THOP1P52888 689 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 PPIDQ08752 370 aaKnown RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 GK3PQ14409 553 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 GRB14Q14449 540 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 ARL13BQ3SXY8 428 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 PAOXQ6QHF9 649 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 PCDH20Q8N6Y1 951 aaKnown RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 NT5C3BQ969T7 300 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 FSD1LQ9BXM9 530 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 ILKAPQ9H0C8 392 aaPredicted RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 CDY2AQ9Y6F7 541 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SBF1O95248 1867 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 F8W8V4 182 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SLC4A1P02730 911 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 THP07101 528 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SBK3P0C264 359 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 TFEBP19484 476 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 RBM20Q5T481 1227 aaKnown RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 GATA6Q92908 595 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 SLC2A13Q96QE2 648 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 NAT9Q9BTE0 207 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 COPS7BQ9H9Q2 264 aaPredicted RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 CASS4Q9NQ75 786 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 FNDC3AQ9Y2H6 1198 aaKnown RBP13.87□□□□□ -0.19
BNIP3-202ENST00000540159 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
BNIP3-202ENST00000540159 RBM47A0AV96 593 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 OR51F1A6NGY5 319 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 SLC35E2BP0CK96 405 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 NELFEP18615 380 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 SEL1L3Q68CR1 1132 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 EPGNQ6UW88 154 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 LRRTM3Q86VH5 581 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 ZC3HC1Q86WB0 502 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 RAB3IL1Q8TBN0 382 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 TEKT5Q96M29 485 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 EIF2B3Q9NR50 452 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PAPOLBQ9NRJ5 636 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PLXNB2O15031 1838 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 MAGEA13PA6NCF6 341 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 ARL5CA6NH57 179 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 HMBSP08397 361 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PIRTP0C851 137 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 KCNE1P15382 129 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 FGFR3P22607 806 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 ETFBP38117 255 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 MSLNQ13421 630 aaPredicted RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PTPRCAPQ14761 206 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 CCDC153Q494R4 210 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 MMEL1Q495T6 779 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 CNSTQ6PJW8 725 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 CENPLQ8N0S6 344 aaPredicted RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 ATPAF2Q8N5M1 289 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 SH3RF2Q8TEC5 729 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 B3GALT6Q96L58 329 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 PPP1R10Q96QC0 940 aaKnown RBP13.86□□□□□ -0.19
BNIP3-202ENST00000540159 TRPV6Q9H1D0 765 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
BNIP3-202ENST00000540159 LIN7AO14910 233 aaPredicted RBP13.85□□□□□ -0.19
BNIP3-202ENST00000540159 DLX3O60479 287 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 OR6B1O95007 311 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 CDH17Q12864 832 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 FAM91A1Q658Y4 838 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 KCTD11Q693B1 232 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 GK5Q6ZS86 529 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 FBXW8Q8N3Y1 598 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 APBB2Q92870 758 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 PABPC5Q96DU9 382 aaKnown RBP13.85□□□□□ -0.19
BNIP3-202ENST00000540159 SEMA6AQ9H2E6 1030 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
BNIP3-202ENST00000540159 TNFRSF12AQ9NP84 129 aa13.85□□□□□ -0.19
BNIP3-202ENST00000540159 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.192e-8■■□□□ 13.6
BNIP3-202ENST00000540159 DNAJC28Q9NX36 388 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms