RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LONP2Q86WA8 852 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SYCE1Q8N0S2 351 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PLD5Q8N7P1 536 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ATP11CQ8NB49 1132 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 NETO2Q8NC67 525 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 EXD1Q8NHP7 514 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 KIAA1524Q8TCG1 905 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 HMGB4Q8WW32 186 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PTPRN2Q92932 1015 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ERLEC1Q96DZ1 483 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 MRGPRX1Q96LB2 322 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ZNF830Q96NB3 372 aaPredicted RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 RNF157Q96PX1 679 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SPON2Q9BUD6 331 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 TPSD1Q9BZJ3 242 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 CEP44Q9C0F1 390 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SLC39A8Q9C0K1 460 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 MKRN2Q9H000 416 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 FBRSQ9HAH7 460 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 LZTFL1Q9NQ48 299 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PRSS16Q9NQE7 514 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ZSCAN32Q9NX65 697 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 GUCA1BQ9UMX6 200 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PCDHGA2Q9Y5H1 932 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PCDHA3Q9Y5H8 950 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ACTL7AQ9Y615 435 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 LRRK1Q38SD2 2015 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 GPR179Q6PRD1 2367 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 hCG_1818297A0A087WSY0 165 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 TARSL2A2RTX5 802 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ZSCAN5CA6NGD5 496 aaPredicted RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 MIF4GDA9UHW6 222 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 J3KR12 359 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 DFFAO00273 331 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 AXIN1O15169 862 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PRAMEF11O60813 436 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 TMCC1O94876 653 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PEX5P50542 639 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 GBE1Q04446 702 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 IL10RBQ08334 325 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 SLC20A2Q08357 652 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 GALNT2Q10471 571 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ELAVL3Q14576 367 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 DLG2Q15700 870 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PPP2R5EQ16537 467 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ACCSLQ4AC99 568 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 TFDP3Q5H9I0 405 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 LEKR1Q6ZMV7 388 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PEX26Q7Z412 305 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 METTL3Q86U44 580 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ZNF354CQ86Y25 554 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 CACUL1Q86Y37 369 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ATPAF2Q8N5M1 289 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PCDH20Q8N6Y1 951 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 OR2A12Q8NGT7 310 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 OR2T3Q8NH03 318 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 CASKIN2Q8WXE0 1202 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ALG3Q92685 438 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 HES6Q96HZ4 224 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 RBM41Q96IZ5 413 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 RSPH9Q9H1X1 276 aaPredicted RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PRDM16Q9HAZ2 1276 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 CD93Q9NPY3 652 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 USP36Q9P275 1121 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 BCCIPQ9P287 314 aaKnown RBP eCLIP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 RAPGEFL1Q9UHV5 662 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 AMFRQ9UKV5 643 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 HPCAL4Q9UM19 191 aa7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 PACSIN2Q9UNF0 486 aaPredicted RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 ARIH1Q9Y4X5 557 aaPredicted RBP7.11□□□□□ -1.27
LPCAT3-209ENST00000540060 APOL1O14791 398 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 MCF2LO15068 1137 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 ALOX15BO15296 676 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 DDX3YO15523 660 aaKnown RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 MAFKO60675 156 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 MAP3K6O95382 1288 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 PEX11BO96011 259 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 GSRP00390 522 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 IGLV3-19P01714 112 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 CTSLP07711 333 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 KRT10P13645 584 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 PTPN7P35236 360 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 P2RY2P41231 377 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 NBL1P41271 181 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 RWDD2BP57060 319 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 COPS2P61201 443 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 RPS14P62263 151 aaKnown RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 ADCY2Q08462 1091 aa7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 SLC10A2Q12908 348 aaPredicted RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 SRSF5Q13243 272 aaKnown RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
LPCAT3-209ENST00000540060 ODF2Q5BJF6 829 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms