RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RETSATQ6NUM9 610 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MAATS1Q7Z4T9 603 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RALGPS2Q86X27 583 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZNF567Q8N184 647 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CCDC89Q8N998 374 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CCDC110Q8TBZ0 833 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NSMCE1Q8WV22 266 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SORCS1Q8WY21 1168 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RPL10LQ96L21 214 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SPATA13Q96N96 652 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 P2RY13Q9BPV8 354 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 FERMT1Q9BQL6 677 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TRIM51Q9BSJ1 452 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CIPCQ9C0C6 399 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RBM22Q9NW64 420 aaKnown RBP eCLIP19.26■□□□□ 0.677e-7■■■□□ 16.4
TNFRSF1A-213ENST00000540022 ELOVL2Q9NXB9 296 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CA14Q9ULX7 337 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NYNRINQ9P2P1 1898 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CACNA1HO95180 2353 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TBC1D3BA6NDS4 549 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 K7ERQ8 282 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GCATO75600 419 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZNF189O75820 626 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GRIA2P42262 883 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 STK19P49842 368 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RENBPP51606 427 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SULT2A1Q06520 285 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PPP1R7Q15435 360 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CYTH1Q15438 398 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SLC44A4Q53GD3 710 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ANKRD20A2Q5SQ80 823 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TEX35Q5T0J7 233 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ANKRD20A1Q5TYW2 823 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ANKRD20A3Q5VUR7 823 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TEX26Q8N6G2 289 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TEKT5Q96M29 485 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 VAT1Q99536 393 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 KRBA1A5PL33 1030 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ANTXRLA6NF34 631 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 FAM187AA6NFU0 413 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZBTB24O43167 697 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SMAD6O43541 496 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 HLA-DQB2P05538 268 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RPL22P35268 128 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MMP13P45452 471 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SERPINH1P50454 418 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ECT2LQ008S8 904 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SLC7A5Q01650 507 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RFTN1Q14699 578 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 EIF4HQ15056 248 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 P3H1Q32P28 736 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 INO80DQ53TQ3 878 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PID1Q7Z2X4 250 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SUGP1Q8IWZ8 645 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CYB5D2Q8WUJ1 264 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 AGAP3Q96P47 875 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PCDH9Q9HC56 1237 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 KLHL8Q9P2G9 620 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ERVW-1Q9UQF0 538 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 HS3ST2Q9Y278 367 aa19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 FCF1Q9Y324 198 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NUP205Q92621 2012 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CXorf51AA0A1B0GTR3 108 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 EFCAB8A8MWE9 144 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MUSKO15146 869 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 OPHN1O60890 802 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 STK10O94804 968 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TMCC1O94876 653 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 APODP05090 189 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ATP5BP06576 529 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 DLDP09622 509 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GLULP15104 373 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CD72P21854 359 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CD68P34810 354 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 VPS41P49754 854 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GEMIN4P57678 1058 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SLC20A2Q08357 652 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PTK6Q13882 451 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PON2Q15165 354 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PTPRNQ16849 979 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PREPLQ4J6C6 727 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SYDE1Q6ZW31 735 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PGBD5Q8N414 524 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 EZH1Q92800 747 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MRGPRX3Q96LB0 322 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NT5MQ9NPB1 228 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SLCO3A1Q9UIG8 710 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SLC25A13Q9UJS0 675 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TRHDEQ9UKU6 1024 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TICRRQ7Z2Z1 1910 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CHD5Q8TDI0 1954 aa19.24■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TIMM44O43615 452 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NEBLO76041 1014 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ASLP04424 464 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RHOXF2BP0C7M4 288 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SRCP12931 536 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MAXP61244 160 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZNF235Q14590 738 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GLE1Q53GS7 698 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TAB3Q8N5C8 712 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms