RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RHOBTB1O94844 696 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 CNTFP26441 200 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TKTP29401 623 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 BRCC3P46736 316 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ACLYP53396 1101 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ARHGEF6Q15052 776 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 APLFQ8IW19 511 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 APOL5Q9BWW9 433 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 PAIP1Q9H074 479 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 PCDH18Q9HCL0 1135 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 MIOSQ9NXC5 875 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 NSMCE4AQ9NXX6 385 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 DPPA5A6NC42 116 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 C16orf96A6NNT2 1141 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ANPEPP15144 967 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 IVDP26440 423 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 KLRC2P26717 231 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 RPL9P32969 192 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 USP4Q13107 963 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 KHDC1Q4VXA5 237 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 AGMOQ6ZNB7 445 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 DDHD1Q8NEL9 900 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 SLC35B2Q8TB61 432 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 URGCPQ8TCY9 931 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TXLNGYQ9BZA5 131 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ULBP1Q9BZM6 244 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 NMRAL1Q9HBL8 299 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 NME7Q9Y5B8 376 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TRIP12Q14669 1992 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 NELFEP18615 380 aaKnown RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CLK1P49759 484 aaKnown RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 RIPK1Q13546 671 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 DMC1Q14565 340 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 TRNP1Q6NT89 227 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 TMC7Q7Z402 723 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 LINC00523Q86TU6 105 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 KCNMB4Q86W47 210 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CLVS1Q8IUQ0 354 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 FICDQ9BVA6 458 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 TRPC7Q9HCX4 862 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 IL1RAPL1Q9NZN1 696 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CORO1CQ9ULV4 474 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 PRG3Q9Y2Y8 225 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 MYBPHLA2RUH7 354 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 F8W8V4 182 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 INPP4BO15327 924 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 PSMD3O43242 534 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 TBC1D4O60343 1298 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ANXA9O76027 345 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 DDHD2O94830 711 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ABHD2P08910 425 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 NDUFV1P49821 464 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CCNHP51946 323 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 GDF10P55107 478 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CA9Q16790 459 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 XKR4Q5GH76 650 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 TBCELQ5QJ74 424 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 UNC5AQ6ZN44 842 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ARHGAP22Q7Z5H3 698 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ULK2Q8IYT8 1036 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 MIER2Q8N344 545 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 OR52K1Q8NGK4 314 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 HMX1Q9NP08 348 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 PKP3Q9Y446 797 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 SLC30A1Q9Y6M5 507 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 DPYSL4O14531 572 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ENDOD1O94919 500 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ESRRBO95718 433 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 FOXN2P32314 431 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 MATKP42679 507 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 OR1G1P47890 313 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 HSPA13P48723 471 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 NEDD8Q15843 81 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 PKDCCQ504Y2 493 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 UBAP2Q5T6F2 1119 aaKnown RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 PIGWQ7Z7B1 504 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CMC1Q7Z7K0 106 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 LGMNQ99538 433 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 OMDQ99983 421 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 C17orf80Q9BSJ5 609 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 RBM22Q9NW64 420 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 ABI2Q9NYB9 513 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 BLOC1S6Q9UL45 172 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 CHKBQ9Y259 395 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-202ENST00000540010 SCN1AP35498 2009 aa10.13□□□□□ -0.79
TRAF1-202ENST00000540010 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 EPHA3P29320 983 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 SKIV2L2P42285 1042 aaKnown RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PTPN9P43378 593 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 MRPS5P82675 430 aaKnown RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 POU4F1Q01851 419 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PRKAA1Q13131 559 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 LPIN1Q14693 890 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TRIM16LQ309B1 348 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TIGD5Q53EQ6 642 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms