RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 UMODL1-AS1Q8N2C9 162 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 PCDH20Q8N6Y1 951 aaKnown RBP11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 DNAJC7Q99615 494 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 TRIM7Q9C029 511 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 NOL6Q9H6R4 1146 aaKnown RBP11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 FSCN3Q9NQT6 498 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 DONSONQ9NYP3 566 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 HPCAL4Q9UM19 191 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 AP4E1Q9UPM8 1137 aa11.04□□□□□ -0.64
SLC3A2-215ENST00000539891 A0A1W2PPC4 97 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 MED19A0JLT2 244 aaPredicted RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PLRG1O43660 514 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 LRCH4O75427 683 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 GJB3O75712 270 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 FSBPO95073 299 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PRNPP04156 253 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 CYP1A2P05177 515 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 CTSLP07711 333 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 CSRP1P21291 193 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 MIPP30301 263 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 MAPK8P45983 427 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 GRIA4P48058 902 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 AFF3P51826 1226 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 ZNF135P52742 658 aaPredicted RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 CNTN1Q12860 1018 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 GRIK2Q13002 908 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PARP15Q460N3 678 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 CARD16Q5EG05 197 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PPM1JQ5JR12 505 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 AGBL4Q5VU57 503 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 DPY19L3Q6ZPD9 716 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 MINDY1Q8N5J2 469 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 OR14C36Q8NHC7 312 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 SNX19Q92543 992 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 SNRNP25Q9BV90 132 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 GTPBP2Q9BX10 602 aaKnown RBP11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 THAP2Q9H0W7 228 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 PCSK1NQ9UHG2 260 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 SLCO1B1Q9Y6L6 691 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
SLC3A2-215ENST00000539891 SSU72P8A0A1W2PR75 194 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 FAM47DPA6NHR8 397 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 RASA4BC9J798 803 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 RASA4O43374 803 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 LATO43561 262 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 BNIP3LO60238 219 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 OPHN1O60890 802 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 KCNK5O95279 499 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 ZNF883P0CG24 379 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 NUDT1P36639 197 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 EIF4A3P38919 411 aaKnown RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 HCAR3P49019 387 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 NDST2P52849 883 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 TPI1P60174 286 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 RACK1P63244 317 aaKnown RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 BNC1Q01954 994 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 CCDC15Q0P6D6 951 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 SLC14A1Q13336 389 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 SERINC3Q13530 473 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 PIGHQ14442 188 aaPredicted RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 CA9Q16790 459 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 ASTE1Q2TB18 679 aaPredicted RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 BOLA3Q53S33 107 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 INO80DQ53TQ3 878 aaPredicted RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 IL27RAQ6UWB1 636 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 NIPA2Q8N8Q9 360 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 CHST14Q8NCH0 376 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 CASKIN2Q8WXE0 1202 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 ARRDC3Q96B67 414 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 LRIG1Q96JA1 1093 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 HEPHQ9BQS7 1158 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 HDAC8Q9BY41 377 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 TNKS2Q9H2K2 1166 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 DHX35Q9H5Z1 703 aaKnown RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 LRRC19Q9H756 370 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 EBF2Q9HAK2 575 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 PREBQ9HCU5 417 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 TM9SF3Q9HD45 589 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 IL36AQ9UHA7 158 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 FCF1Q9Y324 198 aaKnown RBP11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 ACTL7AQ9Y615 435 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.65
SLC3A2-215ENST00000539891 TBC1D3DA0A087WVF3 549 aa11.01□□□□□ -0.65
SLC3A2-215ENST00000539891 TBC1D3IA0A087WXS9 549 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms