RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 C22orf39Q6P5X5 142 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 DPY19L3Q6ZPD9 716 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 RAB44Q7Z6P3 723 aaPredicted RBP17.14■□□□□ 0.33
DDB1-215ENST00000539712 SLCO6A1Q86UG4 719 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 TBC1D3Q8IZP1 549 aaPredicted RBP17.14■□□□□ 0.33
DDB1-215ENST00000539712 PYROXD2Q8N2H3 581 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 TMIEQ8NEW7 156 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 ARRDC3Q96B67 414 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 SELENOOQ9BVL4 669 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
DDB1-215ENST00000539712 TMEM248Q9NWD8 314 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 TOR4AQ9NXH8 423 aa17.14■□□□□ 0.33
DDB1-215ENST00000539712 FAM221BA6H8Z2 402 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 C1QTNF9BB2RNN3 333 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 C1QTNF3-AMACRE9PGA6 284 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 CCP110O43303 1012 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 PCDHGA12O60330 932 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 C1QTNF9P0C862 333 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 SLC20A2Q08357 652 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 NR1I3Q14994 352 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 ARL13BQ3SXY8 428 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 CHCHD4Q8N4Q1 142 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
DDB1-215ENST00000539712 GATA6Q92908 595 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 ARHGEF2Q92974 986 aaKnown RBP17.13■□□□□ 0.33
DDB1-215ENST00000539712 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 RETREG1Q9H6L5 497 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 NOL6Q9H6R4 1146 aaKnown RBP17.13■□□□□ 0.33
DDB1-215ENST00000539712 ATP13A1Q9HD20 1204 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 KLK13Q9UKR3 277 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
DDB1-215ENST00000539712 LAMA5O15230 3695 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 A0A1B0GTQ1 180 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 CXorf51AA0A1B0GTR3 108 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 A0A1W2PQC6 194 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 DKK1O94907 266 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 FTH1P19P0C7X4 201 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 CD38P28907 300 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 MAPKAPK2P49137 400 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 ARSIQ5FYB1 569 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 RETSATQ6NUM9 610 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 RWDD4Q6NW29 188 aaKnown RBP17.12■□□□□ 0.33
DDB1-215ENST00000539712 DNAJC24Q6P3W2 148 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 DNAAF5Q86Y56 855 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 SERAC1Q96JX3 654 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 MCEEQ96PE7 176 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 CNPY3Q9BT09 278 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 CEP44Q9C0F1 390 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 DNAI1Q9UI46 699 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
DDB1-215ENST00000539712 NEUROG3Q9Y4Z2 214 aa17.12■□□□□ 0.33
DDB1-215ENST00000539712 TLR4O00206 839 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 KPNA3O00505 521 aaPredicted RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 FLRT2O43155 660 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 PROS1P07225 676 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 L1CAMP32004 1257 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 IL9RQ01113 521 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 MAMLD1Q13495 774 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 ST3GAL2Q16842 350 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 NAPEPLDQ6IQ20 393 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 ZNF571Q7Z3V5 609 aaPredicted RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 SLFN11Q7Z7L1 901 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 SPATS2Q86XZ4 545 aaKnown RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 ARFGAP1Q8N6T3 406 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 GRIN3AQ8TCU5 1115 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 RHBDD1Q8TEB9 315 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 ADAMTS14Q8WXS8 1223 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 VCPIP1Q96JH7 1222 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 HDAC8Q9BY41 377 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 PREBQ9HCU5 417 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 AASDHPPTQ9NRN7 309 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 FZD10Q9ULW2 581 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
DDB1-215ENST00000539712 PCDHB9Q9Y5E1 797 aa17.11■□□□□ 0.33
DDB1-215ENST00000539712 TP53BP1Q12888 1972 aaPredicted RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 LEFTY1O75610 366 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 KRT37O76014 449 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 TRIM16O95361 564 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 PRNPP04156 253 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 ATXN1LP0C7T5 689 aaKnown RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 TNFAIP3P21580 790 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 PRKCIP41743 596 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 CCT8P50990 548 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 C21orf59P57076 290 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 NXPH1P58417 271 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 ZNF284Q2VY69 593 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 CARD16Q5EG05 197 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 PLEKHA7Q6IQ23 1121 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 UNQ6494/PRO21346Q6UXR6 183 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 ERN2Q76MJ5 926 aaKnown RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms