RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TASP1Q9H6P5 420 aa7.09□□□□□ -1.27
TRAV11-201ENST00000539512 PEMTQ9UBM1 199 aa7.09□□□□□ -1.27
TRAV11-201ENST00000539512 CAMK2AQ9UQM7 478 aa7.09□□□□□ -1.27
TRAV11-201ENST00000539512 FRMD4BQ9Y2L6 1034 aa7.09□□□□□ -1.27
TRAV11-201ENST00000539512 TRBV5-3A0A0A0MS03 114 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 TEX13CA0A0J9YWL9 993 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 ARHGAP10A1A4S6 786 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 C17orf100A8MU93 164 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 ADAP00813 363 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 WNT1P04628 370 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 TNFAIP3P21580 790 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 C21orf58P58505 322 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 KDELC2Q7Z4H8 507 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 SRRM1Q8IYB3 904 aaKnown RBP7.08□□□□□ -1.28
TRAV11-201ENST00000539512 LRRC57Q8N9N7 239 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 NFKBIDQ8NI38 313 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 HDAC7Q8WUI4 952 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 UCMAQ8WVF2 138 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 EME1Q96AY2 570 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 TRMOQ9BU70 441 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 TTYH1Q9H313 450 aaPredicted RBP7.08□□□□□ -1.28
TRAV11-201ENST00000539512 PNRC2Q9NPJ4 139 aaKnown RBP7.08□□□□□ -1.28
TRAV11-201ENST00000539512 ATP8A2Q9NTI2 1148 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 DECR2Q9NUI1 292 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 BABAM1Q9NWV8 329 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 TUBA8Q9NY65 449 aaPredicted RBP7.08□□□□□ -1.28
TRAV11-201ENST00000539512 HDAC6Q9UBN7 1215 aa7.08□□□□□ -1.28
TRAV11-201ENST00000539512 ZNF804BA4D1E1 1349 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 TARSL2A2RTX5 802 aaKnown RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 C17orf102A2RUQ5 167 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 HMGB1P1B2RPK0 211 aaPredicted RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 SPTLC2O15270 562 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 RTN3O95197 1032 aaPredicted RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 COX7A2P14406 83 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 POU1F1P28069 291 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 HOXD9P28356 352 aaPredicted RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 RFC1P35251 1148 aaPredicted RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 GEMIN4P57678 1058 aaKnown RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 EFNB1P98172 346 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 NEXNQ0ZGT2 675 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 DSTYKQ6XUX3 929 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 TRAPPC11Q7Z392 1133 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 CAMK1DQ8IU85 385 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 AGXT2Q9BYV1 514 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 MAF1Q9H063 256 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 CXorf56Q9H5V9 222 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 MSRB1Q9NZV6 116 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 NLKQ9UBE8 527 aa7.07□□□□□ -1.28
TRAV11-201ENST00000539512 SLC25A10Q9UBX3 287 aaPredicted RBP7.07□□□□□ -1.28
TRAV11-201ENST00000539512 A0A096LPK6 155 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 A0A1W2PPH5 198 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 TTC36A6NLP5 189 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 FGBP02675 491 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 URODP06132 367 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 FMO4P31512 558 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 DPP6P42658 865 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 CTCFP49711 727 aaPredicted RBP7.06□□□□□ -1.28
TRAV11-201ENST00000539512 BLKP51451 505 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 ARSFP54793 590 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 UFM1P61960 85 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 FOXD4Q12950 439 aaPredicted RBP7.06□□□□□ -1.28
TRAV11-201ENST00000539512 FBXO43Q4G163 708 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 SYTL3Q4VX76 610 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 PIK3CD-AS1Q5SR53 167 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 NCAPH2Q6IBW4 605 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 ATF7IPQ6VMQ6 1270 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 PRSS45Q7RTY3 260 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 R3HCC1LQ7Z5L2 792 aaKnown RBP7.06□□□□□ -1.28
TRAV11-201ENST00000539512 MRPL10Q7Z7H8 261 aaKnown RBP7.06□□□□□ -1.28
TRAV11-201ENST00000539512 TMC8Q8IU68 726 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 GDPD5Q8WTR4 605 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 RFFLQ8WZ73 363 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 SAAL1Q96ER3 474 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 ZNF333Q96JL9 665 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 CLSTN3Q9BQT9 956 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 SLC25A18Q9H1K4 315 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 KCND2Q9NZV8 630 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 PCDHGB5Q9Y5G0 923 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 CLDN16Q9Y5I7 305 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 KAT6AQ92794 2004 aa7.06□□□□□ -1.28
TRAV11-201ENST00000539512 CNOT3O75175 753 aaKnown RBP7.05□□□□□ -1.28
TRAV11-201ENST00000539512 TBX18O95935 607 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 F9P00740 461 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 CD4P01730 458 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 MMP3P08254 477 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 CHRNB1P11230 501 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 GPR12P47775 334 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 ALDH7A1P49419 539 aaKnown RBP7.05□□□□□ -1.28
TRAV11-201ENST00000539512 MTX1Q13505 466 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 RUNX2Q13950 521 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 VEPH1Q14D04 833 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 INPP5JQ15735 1006 aaPredicted RBP7.05□□□□□ -1.28
TRAV11-201ENST00000539512 RPE65Q16518 533 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 ME3Q16798 604 aa7.05□□□□□ -1.28
TRAV11-201ENST00000539512 MANEAQ5SRI9 462 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms