RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 KCNK5O95279 499 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 HNRNPH3P31942 346 aaKnown RBP15.98■□□□□ 0.15
CIT-210ENST00000539413 RECQLP46063 649 aaPredicted RBP15.98■□□□□ 0.15
CIT-210ENST00000539413 CSNK1EP49674 416 aaKnown RBP15.98■□□□□ 0.15
CIT-210ENST00000539413 TPI1P60174 286 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 ARSIQ5FYB1 569 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 CCDC122Q5T0U0 273 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 ERMARDQ5T6L9 678 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 AGBL4Q5VU57 503 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 DPY19L3Q6ZPD9 716 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 PCDH20Q8N6Y1 951 aaKnown RBP15.98■□□□□ 0.15
CIT-210ENST00000539413 GRIN3AQ8TCU5 1115 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 ARRDC3Q96B67 414 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 CATSPERBQ9H7T0 1116 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 IL36AQ9UHA7 158 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3DA0A087WVF3 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3IA0A087WXS9 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3EA0A087X179 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3KA0A087X1G2 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 A0A1B0GVT2 93 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 A0A1W2PPC4 97 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3FA6NER0 549 aaPredicted RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3LB9A6J9 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 EEF2KO00418 725 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 KPNA3O00505 521 aaPredicted RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 FGF10O15520 208 aaPredicted RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 SLC7A4O43246 635 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 PLRG1O43660 514 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 KDELR3O43731 214 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 PRPSAP2O60256 369 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 OPHN1O60890 802 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3HP0C7X1 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 EIF4A3P38919 411 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 DNA2P51530 1060 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 AFF3P51826 1226 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 PPP2CBP62714 309 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 PPP2CAP67775 309 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 CARD16Q5EG05 197 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3GQ6DHY5 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3CQ6IPX1 549 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 PSAPL1Q6NUJ1 521 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 ALKBH5Q6P6C2 394 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 LAYNQ6UX15 382 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 ZNF354CQ86Y25 554 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 VSTM4Q8IW00 320 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 TBC1D3Q8IZP1 549 aaPredicted RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 TMIEQ8NEW7 156 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 ARHGEF26Q96DR7 871 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 HMCESQ96FZ2 354 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 BTBD6Q96KE9 485 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 KCTD15Q96SI1 283 aaPredicted RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 TM6SF2Q9BZW4 377 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 ZDHHC5Q9C0B5 715 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 KLC2Q9H0B6 622 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 OSGEPQ9NPF4 335 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 DNAAF2Q9NVR5 837 aaKnown RBP15.97■□□□□ 0.15
CIT-210ENST00000539413 HPCAL4Q9UM19 191 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 NENFQ9UMX5 172 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 WASF2Q9Y6W5 498 aa15.97■□□□□ 0.15
CIT-210ENST00000539413 CXorf51AA0A1B0GTR3 108 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 RASA4BC9J798 803 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 GIPC1O14908 333 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 RASA4O43374 803 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 LEFTY1O75610 366 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 GJB3O75712 270 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 PRNPP04156 253 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 TCF4P15884 667 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 HTR7P34969 479 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 NOVA1P51513 510 aaKnown RBP15.96■□□□□ 0.15
CIT-210ENST00000539413 CCR5P51681 352 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 CCNHP51946 323 aaPredicted RBP15.96■□□□□ 0.15
CIT-210ENST00000539413 GEMIN4P57678 1058 aaKnown RBP15.96■□□□□ 0.15
CIT-210ENST00000539413 YBEYP58557 167 aaPredicted RBP15.96■□□□□ 0.15
CIT-210ENST00000539413 TAS2R38P59533 333 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 TRIM14Q14142 442 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 PIP5KL1Q5T9C9 394 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 UMODL1-AS1Q8N2C9 162 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 DEFB124Q8NES8 71 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 OR8K1Q8NGG5 319 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 ISG20Q96AZ6 181 aaKnown RBP15.96■□□□□ 0.15
CIT-210ENST00000539413 SLC6A18Q96N87 628 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 DNAJC7Q99615 494 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 NUP85Q9BW27 656 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 KDM4CQ9H3R0 1056 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 IL21RQ9HBE5 538 aa15.96■□□□□ 0.15
CIT-210ENST00000539413 NUMA1Q14980 2115 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 PLXNA2O75051 1894 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 EIF3CLB5ME19 914 aaKnown RBP15.95■□□□□ 0.14
CIT-210ENST00000539413 WNT9AO14904 365 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 BUB1O43683 1085 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 CYP1A2P05177 515 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 ADRB1P08588 477 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 CD59P13987 128 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 CSRP1P21291 193 aaKnown RBP15.95■□□□□ 0.14
CIT-210ENST00000539413 IL1R2P27930 398 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 GKP32189 559 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 PCK1P35558 622 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 GRIA4P48058 902 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 SERINC3Q13530 473 aa15.95■□□□□ 0.14
CIT-210ENST00000539413 ACAP1Q15027 740 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms