RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 RECQLP46063 649 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 NRG1Q02297 640 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 C1QBPQ07021 282 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 NAPEPLDQ6IQ20 393 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 DPY19L3Q6ZPD9 716 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 GLRX5Q86SX6 157 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 NLRP14Q86W24 1093 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TRIM69Q86WT6 500 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TMIEQ8NEW7 156 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 MCEEQ96PE7 176 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 CDC6Q99741 560 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 BPIFA3Q9BQP9 254 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 DYRK4Q9NR20 520 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 IL36AQ9UHA7 158 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TPX2Q9ULW0 747 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 NEU3Q9UQ49 428 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 APOBEC2Q9Y235 224 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 MSRB2Q9Y3D2 182 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 SPEGQ15772 3267 aa19.47■□□□□ 0.71
TNFRSF1A-212ENST00000539372 A0A1B0GTQ1 180 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TCRBV5S1A1TA0A578 114 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TLR4O00206 839 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 CCP110O43303 1012 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 PCDHGA12O60330 932 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 PRNPP04156 253 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 ATXN1LP0C7T5 689 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 RHOQP17081 205 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 RPL7AP62424 266 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 SLC45A4Q5BKX6 768 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 ACAD10Q6JQN1 1059 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 SCYL2Q6P3W7 929 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 IRF2BP2Q7Z5L9 587 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 GATAD2AQ86YP4 633 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 PYROXD2Q8N2H3 581 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 ADAMTS14Q8WXS8 1223 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 BAP1Q92560 729 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TBC1D31Q96DN5 1066 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 ELF4Q99607 663 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 CEP44Q9C0F1 390 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 PREBQ9HCU5 417 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 GDF3Q9NR23 364 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TMEM248Q9NWD8 314 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 TAS2R14Q9NYV8 317 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 CA5BQ9Y2D0 317 aa19.46■□□□□ 0.71
TNFRSF1A-212ENST00000539372 KMT2BQ9UMN6 2715 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 TMCO5BA8MYB1 307 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 DFNA5O60443 496 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 RNGTTO60942 597 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 LEFTY1O75610 366 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CD160O95971 181 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CCDC172P0C7W6 258 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 TNFAIP3P21580 790 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 GRK6P43250 576 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 MAPKAPK2P49137 400 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ZNF143P52747 638 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SLC20A2Q08357 652 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SHBQ15464 509 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 LEKR1Q6ZMV7 388 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SLFN11Q7Z7L1 901 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 MCOLN2Q8IZK6 566 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 PCDH20Q8N6Y1 951 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 KLK6Q92876 244 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ARHGEF2Q92974 986 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 NTAN1Q96AB6 310 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 MYOCQ99972 504 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 TM6SF2Q9BZW4 377 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 TOR4AQ9NXH8 423 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 WASF2Q9Y6W5 498 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ASPMQ8IZT6 3477 aa19.45■□□□□ 0.7
TNFRSF1A-212ENST00000539372 USP24Q9UPU5 2620 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CABIN1Q9Y6J0 2220 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 A0A1W2PQU0 124 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ANKRD62A6NC57 917 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 LRRC53A6NM62 1247 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 PRLRP16471 622 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ZNF165P49910 485 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 NXPH1P58417 271 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SETMARQ53H47 684 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CARD16Q5EG05 197 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 DCUN1D2Q6PH85 259 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ERN2Q76MJ5 926 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SPATS2Q86XZ4 545 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 MFSD2AQ8NA29 543 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SYT11Q9BT88 431 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ZMIZ1Q9ULJ6 1067 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 DMTF1Q9Y222 760 aa19.44■□□□□ 0.7
TNFRSF1A-212ENST00000539372 TP53BP1Q12888 1972 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SLC31A1O15431 190 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 RAMP2O60895 175 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 PCDH8O95206 1070 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 NUDT1P36639 197 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 ETFBP38117 255 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CCNHP51946 323 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 OGDHQ02218 1023 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 CCDC15Q0P6D6 951 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 SCAPQ12770 1279 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 STAT4Q14765 748 aa19.43■□□□□ 0.7
TNFRSF1A-212ENST00000539372 POLD3Q15054 466 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms