RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PTPN2P17706 415 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 CDC25CP30307 473 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 CCR2P41597 374 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 COG7P83436 770 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 AP1B1Q10567 949 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 PDIA2Q13087 525 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 AUHQ13825 339 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 STAT4Q14765 748 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 RASA2Q15283 850 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 GALNTL6Q49A17 601 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 ACCSLQ4AC99 568 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 ARHGEF18Q6ZSZ5 1173 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 TBC1D1Q86TI0 1168 aaPredicted RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 TDRPQ86YL5 185 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 PDIK1LQ8N165 341 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 ZNF567Q8N184 647 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 UMODL1-AS1Q8N2C9 162 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
DDB1-213ENST00000539332 CCDC33Q8N5R6 958 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 MRPS31Q92665 395 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 AZIN2Q96A70 460 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 LRRC39Q96DD0 335 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 SLC22A12Q96S37 553 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 VAT1Q99536 393 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 SELENOSQ9BQE4 189 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 GORASP1Q9BQQ3 440 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 RNF38Q9H0F5 515 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 SIK2Q9H0K1 926 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 NOL6Q9H6R4 1146 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 PPCSQ9HAB8 311 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 XAB2Q9HCS7 855 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 TMEM248Q9NWD8 314 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 FETUBQ9UGM5 382 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 LGALS13Q9UHV8 139 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 TRHDEQ9UKU6 1024 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 COMMD10Q9Y6G5 202 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 TEX264Q9Y6I9 313 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 TMEM265A0A087WTH1 108 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 SLC12A8A0AV02 714 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 RASGRF2O14827 1237 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 GLP2RO95838 553 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 OLFM2O95897 454 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 MOCS2O96007 188 aaPredicted RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 VIMP08670 466 aaKnown RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 C7P10643 843 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 NEFHP12036 1026 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 MLNP12872 115 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 GJA1P17302 382 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 HDCP19113 662 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 CCNCP24863 283 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 CCNHP51946 323 aaPredicted RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 GPX6P59796 221 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 NCALDP61601 193 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 IFI35P80217 286 aaPredicted RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 CYP4F8P98187 520 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 HYAL1Q12794 435 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 BNIP1Q12981 228 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 PARP6Q2NL67 630 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 TCEAL5Q5H9L2 206 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 FAXCQ5TGI0 409 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 TXNDC8Q6A555 127 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 NADSYN1Q6IA69 706 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 TMEM184AQ6ZMB5 413 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 LRRC34Q8IZ02 419 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 ZBED8Q8IZ13 594 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 RIBC1Q8N443 379 aaPredicted RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 C12orf76Q8N812 135 aaPredicted RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 ATP11CQ8NB49 1132 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 LEMD2Q8NC56 503 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 NETO2Q8NC67 525 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 EPS8L3Q8TE67 593 aaKnown RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 PLD4Q96BZ4 506 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 GRAMD1AQ96CP6 724 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 KLHL29Q96CT2 875 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 GCNAQ96QF7 691 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 CYP2S1Q96SQ9 504 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 IL12RB2Q99665 862 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 GBA3Q9H227 469 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 SFXN1Q9H9B4 322 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 TRPC7Q9HCX4 862 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 ARHGEF3Q9NR81 526 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 NDFIP2Q9NV92 336 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 DZANK1Q9NVP4 752 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 LMCD1Q9NZU5 365 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 RPL26L1Q9UNX3 145 aaKnown RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 ARL2BPQ9Y2Y0 163 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 MYOFQ9NZM1 2061 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 ERI2A8K979 691 aaKnown RBP9.01□□□□□ -0.97
DDB1-213ENST00000539332 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 LINC01565O15544 149 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 MAFKO60675 156 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 BANF1O75531 89 aa9.01□□□□□ -0.97
DDB1-213ENST00000539332 SNUPNO95149 360 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms