RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 FESP07332 822 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 LRPAP1P30533 357 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 PSEN2P49810 448 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 IRX1P78414 480 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 ZNF280DQ6N043 979 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TAC4Q86UU9 113 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 FSTL5Q8N475 847 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 IPMKQ8NFU5 416 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 PPP2R3CQ969Q6 453 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 IL22Q9GZX6 179 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TLK1Q9UKI8 766 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TTC3P53804 2025 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 TMEM114B3SHH9 223 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 STX16-NPEPL1H3BU86 382 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 CFLARO15519 480 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 GRID2O43424 1007 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 VAPBO95292 243 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 TFEBP19484 476 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 PKNOX1P55347 436 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 CDH17Q12864 832 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 PDCD2Q16342 344 aaPredicted RBP12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ANO4Q32M45 955 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 NXNQ6DKJ4 435 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ADGRG6Q86SQ4 1221 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 DPF3Q92784 378 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 USP13Q92995 863 aaPredicted RBP12.15□□□□□ -0.46
CPNE8-203ENST00000538596 GPR22Q99680 433 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 RTKNQ9BST9 563 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 KLHL4Q9C0H6 718 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 DNAI2Q9GZS0 605 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 CNGB3Q9NQW8 809 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 SPATS2LQ9NUQ6 558 aaKnown RBP12.15□□□□□ -0.46
CPNE8-203ENST00000538596 GLTPD2A6NH11 291 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 NCAM2O15394 837 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 FBXO21O94952 628 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 NPY2RP49146 381 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 RPL14P50914 215 aaKnown RBP12.15□□□□□ -0.46
CPNE8-203ENST00000538596 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ITPRIPL1Q6GPH6 555 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ESRP1Q6NXG1 681 aaKnown RBP12.15□□□□□ -0.46
CPNE8-203ENST00000538596 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 ZYG11AQ6WRX3 759 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 KBTBD6Q86V97 674 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 LSMEM2Q8N112 164 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 EPAS1Q99814 870 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 DRC3Q9H069 523 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 XPR1Q9UBH6 696 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 TRHDEQ9UKU6 1024 aa12.15□□□□□ -0.46
CPNE8-203ENST00000538596 TXNDC9O14530 226 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 HDAC3O15379 428 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PGK1P00558 417 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 BDNFP23560 247 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 HCAR3P49019 387 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PGFP49763 221 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 THOP1P52888 689 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CRYBB1P53674 252 aaPredicted RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CSE1LP55060 971 aaKnown RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CCL14Q16627 93 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 GRAMD1BQ3KR37 738 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 LIPMQ5VYY2 423 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 FBXL19Q6PCT2 694 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CCNYL1Q8N7R7 359 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 HASPINQ8TF76 798 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 NXNL1Q96CM4 212 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 RCN3Q96D15 328 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CDRT15Q96T59 188 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PTPN18Q99952 460 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 SUDS3Q9H7L9 328 aaPredicted RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 NUDT5Q9UKK9 219 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 RAP2CQ9Y3L5 183 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 ERI2A8K979 691 aaKnown RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 C9IYK1 514 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 AURKAO14965 403 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 AHCYL1O43865 530 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 DLX3O60479 287 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 XRCC1P18887 633 aaPredicted RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 DPP6P42658 865 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CXCR3P49682 368 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 NUMBP49757 651 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 CSRP3P50461 194 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 GJA9P57773 515 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 NOMO2Q5JPE7 1267 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 RPS27LQ71UM5 84 aaKnown RBP12.14□□□□□ -0.47
CPNE8-203ENST00000538596 DSELQ8IZU8 1212 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms