RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 BBC3Q96PG8 261 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-207ENST00000536483 FZD4Q9ULV1 537 aa12.75□□□□□ -0.37
PRKDC-207ENST00000536483 ALOX15BO15296 676 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 SERPINC1P01008 464 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ITGAVP06756 1048 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 CD38P28907 300 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 NNMTP40261 264 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 PSMD8P48556 350 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 NUMBP49757 651 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ATP11AP98196 1134 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ELAVL3Q14576 367 aaKnown RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 C15orf59Q2T9L4 293 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ARL13BQ3SXY8 428 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 C6orf118Q5T5N4 469 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ZNF571Q7Z3V5 609 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 TMPRSS12Q86WS5 348 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 FAM131BQ86XD5 332 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 STK40Q8N2I9 435 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 AADATQ8N5Z0 425 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 OR14C36Q8NHC7 312 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 CRELD1Q96HD1 420 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 RPL10LQ96L21 214 aaKnown RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 PSMB7Q99436 277 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 CNPY3Q9BT09 278 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 SELENOOQ9BVL4 669 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 ZYG11BQ9C0D3 744 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 NEU3Q9UQ49 428 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 BZW2Q9Y6E2 419 aaKnown RBP12.74□□□□□ -0.37
PRKDC-207ENST00000536483 PLXNA2O75051 1894 aa12.74□□□□□ -0.37
PRKDC-207ENST00000536483 A0A087WV48 116 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 A0A1W2PR77 199 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 PLK4O00444 970 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 ENC1O14682 589 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 MCF2LO15068 1137 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 ZMPSTE24O75844 475 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-207ENST00000536483 JUPP14923 745 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 GOT1P17174 413 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 TNFAIP3P21580 790 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 GPD1P21695 349 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 RRM1P23921 792 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 L1CAMP32004 1257 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 GGCXP38435 758 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-207ENST00000536483 CCR5P51681 352 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 CLCN6P51797 869 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 ADPRHP54922 357 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 UBASH3AP57075 661 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 KRT83P78385 493 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 MAMLD1Q13495 774 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 ASIC2Q16515 512 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 RAB6CQ53S08 254 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-207ENST00000536483 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 DNAJC24Q6P3W2 148 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 NLRP14Q86W24 1093 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 SH2D3CQ8N5H7 860 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 EID2Q8N6I1 236 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 FAM172AQ8WUF8 416 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 SERAC1Q96JX3 654 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 VPS28Q9UK41 221 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 PPM1HQ9ULR3 514 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 CAPN11Q9UMQ6 739 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 PCDHGA1Q9Y5H4 931 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 BPTFQ12830 3046 aa12.73□□□□□ -0.37
PRKDC-207ENST00000536483 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRKDC-207ENST00000536483 RTN2O75298 545 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 GJB6O95452 261 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 ADH1BP00325 375 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 IL1BP01584 269 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 RHOCP08134 193 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 VAV1P15498 845 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 RHOQP17081 205 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 C5AR1P21730 350 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 OR1E1P30953 314 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 MAPKAPK2P49137 400 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
PRKDC-207ENST00000536483 ZBED6P86452 979 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 BNIP3Q12983 259 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
PRKDC-207ENST00000536483 DCBLD2Q96PD2 775 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms