RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SYN3O14994 580 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 PSMD3O43242 534 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 NBNO60934 754 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 HOXD10P28358 340 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 PTDSS1P48651 473 aaKnown RBP13.59□□□□□ -0.23
VPS33B-202ENST00000535906 NRG1Q02297 640 aaPredicted RBP13.59□□□□□ -0.23
VPS33B-202ENST00000535906 POU6F1Q14863 301 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 MSANTD2Q6P1R3 559 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 LRRC8DQ7L1W4 858 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 TEX9Q8N6V9 391 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 RBM22Q9NW64 420 aaKnown RBP eCLIP13.59□□□□□ -0.23
VPS33B-202ENST00000535906 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 AP3B1O00203 1094 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 ANXA9O76027 345 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 INHAP05111 366 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 SERPINB8P50452 374 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 ARPP19P56211 112 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 TBX4P57082 545 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 EFEMP1Q12805 493 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
VPS33B-202ENST00000535906 KDELC2Q7Z4H8 507 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 TFAP2DQ7Z6R9 452 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 DBF4BQ8NFT6 615 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 MIEF2Q96C03 454 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 FICDQ9BVA6 458 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 FTHL17Q9BXU8 183 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 PPARGC1AQ9UBK2 798 aaKnown RBP13.59□□□□□ -0.23
VPS33B-202ENST00000535906 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
VPS33B-202ENST00000535906 A0A096LPK6 155 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ARVCFO00192 962 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ENPP3O14638 875 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ARRB2P32121 409 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 SLC1A6P48664 564 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 IRF9Q00978 393 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 TBCCQ15814 346 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PSMD5Q16401 504 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CMPK2Q5EBM0 449 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 TIGD7Q6NT04 549 aaPredicted RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 TREML1Q86YW5 311 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 TMPRSS6Q8IU80 811 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ARHGAP24Q8N264 748 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 VPS39Q96JC1 886 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CAPNS2Q96L46 248 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 EBF4Q9BQW3 602 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CRISPLD1Q9H336 500 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ATXN3LQ9H3M9 355 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 IL37Q9NZH6 218 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 IPO11Q9UI26 975 aaKnown RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 DOCK4Q8N1I0 1966 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 MYLKQ15746 1914 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 TET1Q8NFU7 2136 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 WASH4PA8MWX3 477 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PMPCBO75439 489 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CNTN5O94779 1100 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 DNAJB2P25686 324 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ADRA1AP35348 466 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 MAGEA11P43364 429 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PGGT1BP53609 377 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CSE1LP55060 971 aaKnown RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 KPNB1Q14974 876 aaKnown RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PCID2Q5JVF3 399 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PKN3Q6P5Z2 889 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 RSPO2Q6UXX9 243 aaPredicted RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 ABI1Q8IZP0 508 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 KIRREL3Q8IZU9 778 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 CASD1Q96PB1 797 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
VPS33B-202ENST00000535906 STOML1Q9UBI4 398 aa13.58□□□□□ -0.24
VPS33B-202ENST00000535906 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-202ENST00000535906 FAM92AA1XBS5 289 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 B2RBV5 119 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 PEX11BO96011 259 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 C2P06681 752 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 ENO1P06733 434 aaKnown RBP13.57□□□□□ -0.24
VPS33B-202ENST00000535906 SELPP16109 830 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 GCKP35557 465 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 GEMP55040 296 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 GRM3Q14832 879 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 ALFQ53S48 1182 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 PDPK2PQ6A1A2 396 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 CLEC14AQ86T13 490 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 MIB1Q86YT6 1006 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 PIWIL2Q8TC59 973 aaKnown RBP13.57□□□□□ -0.24
VPS33B-202ENST00000535906 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 CCDC106Q9BWC9 280 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 HMX1Q9NP08 348 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-202ENST00000535906 MARCH5Q9NX47 278 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 DNAJC16Q9Y2G8 782 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
VPS33B-202ENST00000535906 NT5C1B-RDH14C9J2C7 533 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 J3KR12 359 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 LIN7AO14910 233 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms