RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 C1QTNF7Q9BXJ2 289 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 NLRC4Q9NPP4 1024 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 KLHL11Q9NVR0 708 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SNX11Q9Y5W9 270 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 CSNK1G3Q9Y6M4 447 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SYNJ2BP-COX16A0A087WUM0 186 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SH3BP5O60239 455 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 RPS21P63220 83 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 E2F1Q01094 437 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 ASIC2Q16515 512 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 RALGPS1Q5JS13 557 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 PIP5KL1Q5T9C9 394 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 TRNP1Q6NT89 227 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SLC20A1Q8WUM9 679 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 GRAMD1AQ96CP6 724 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 CFAP57Q96MR6 1250 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 C11orf70Q9BRQ4 267 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 HSD3B7Q9H2F3 369 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 FZD10Q9ULW2 581 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 CEP250Q9BV73 2442 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3DA0A087WVF3 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3IA0A087WXS9 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3EA0A087X179 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3KA0A087X1G2 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3FA6NER0 549 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3LB9A6J9 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 RAMP2O60895 175 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 RTN2O75298 545 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 CNTN5O94779 1100 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3HP0C7X1 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 FTH1P19P0C7X4 201 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 PNMA6AP0CW24 399 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 HNRNPA2B1P22626 353 aaKnown RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 MAOBP27338 520 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 STK19P49842 368 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 FOXC1Q12948 553 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3GQ6DHY5 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3CQ6IPX1 549 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 CCNI2Q6ZMN8 369 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TMPRSS12Q86WS5 348 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 LRRC49Q8IUZ0 686 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TBC1D3Q8IZP1 549 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 FAM172AQ8WUF8 416 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 BAP1Q92560 729 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 PCDHB18PQ96TA0 734 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 GPR27Q9NS67 375 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 FTSJ1Q9UET6 329 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TSPAN11A1L157 253 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 LZTS3O60299 673 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 CSNK1EP49674 416 aaKnown RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 HDAC4P56524 1084 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 CNTN1Q12860 1018 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 AGERQ15109 404 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 WDR59Q6PJI9 974 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 ABI3BPQ7Z7G0 1075 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 AOPEPQ8N6M6 819 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF366Q8N895 744 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 TMEM145Q8NBT3 493 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 ATL2Q8NHH9 583 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 KLHDC7BQ96G42 594 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 SERAC1Q96JX3 654 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 RPL10LQ96L21 214 aaKnown RBP10.6□□□□□ -0.71
CSDE1-217ENST00000534699 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF599Q96NL3 588 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 ARHGAP20Q9P2F6 1191 aa10.6□□□□□ -0.71
CSDE1-217ENST00000534699 GIPC1O14908 333 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 IGSF6O95976 241 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 NFKBIAP25963 317 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 EPHA8P29322 1005 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 PCK1P35558 622 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 HSPA9P38646 679 aaKnown RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 YPEL5P62699 121 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 TMEM259Q4ZIN3 620 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF805Q5CZA5 627 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 KANSL1Q7Z3B3 1105 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 CIR1Q86X95 450 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 OR2AP1Q8NGE2 309 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 SAP25Q8TEE9 199 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 BTN2A2Q8WVV5 523 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RFFLQ8WZ73 363 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ANLNQ9NQW6 1124 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 AASDHPPTQ9NRN7 309 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 FNDC3AQ9Y2H6 1198 aaKnown RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 PCNX2A6NKB5 2137 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ASCC3Q8N3C0 2202 aaKnown RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 A6NNZ2 444 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 H0Y8X5 98 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms